Gene : Sevir.3G018500 S. viridis v2.1
Defline:  (1 of 1) PTHR13872:SF23 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B Genomic Order:  204
Name:  ? Sevir.3G018500 Secondary Identifier:  ? PAC:40646075
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G018500 0.5kb upstream 0.5kb upstream 5895 true Chr_03: 1080549-1086443 Setaria viridis
Sevir.3G018500 0.5kb upstream 0.5kb upstream 500 false Chr_03: 1080549-1081048 Setaria viridis
Sevir.3G018500 0.5kb downstream 0.5kb downstream 5895 true Chr_03: 1081049-1086943 Setaria viridis
Sevir.3G018500 0.5kb downstream 0.5kb downstream 500 false Chr_03: 1086444-1086943 Setaria viridis
Sevir.3G018500 1.0kb upstream 1.0kb upstream 6395 true Chr_03: 1080049-1086443 Setaria viridis
Sevir.3G018500 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 1080049-1081048 Setaria viridis
Sevir.3G018500 1.0kb downstream 1.0kb downstream 6395 true Chr_03: 1081049-1087443 Setaria viridis
Sevir.3G018500 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 1086444-1087443 Setaria viridis
Sevir.3G018500 2.0kb upstream 2.0kb upstream 7395 true Chr_03: 1079049-1086443 Setaria viridis
Sevir.3G018500 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 1079049-1081048 Setaria viridis
Sevir.3G018500 2.0kb downstream 2.0kb downstream 7395 true Chr_03: 1081049-1088443 Setaria viridis
Sevir.3G018500 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 1086444-1088443 Setaria viridis
Sevir.3G018500 5.0kb upstream 5.0kb upstream 10395 true Chr_03: 1076049-1086443 Setaria viridis
Sevir.3G018500 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 1076049-1081048 Setaria viridis
Sevir.3G018500 5.0kb downstream 5.0kb downstream 10395 true Chr_03: 1081049-1091443 Setaria viridis
Sevir.3G018500 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 1086444-1091443 Setaria viridis
Sevir.3G018500 10.0kb upstream 10.0kb upstream 15395 true Chr_03: 1071049-1086443 Setaria viridis
Sevir.3G018500 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 1071049-1081048 Setaria viridis
Sevir.3G018500 10.0kb downstream 10.0kb downstream 15395 true Chr_03: 1081049-1096443 Setaria viridis
Sevir.3G018500 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 1086444-1096443 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194713 5267 Panicoideae View MSA
124575756 5269 Grass View MSA
122045472 5273 Angiosperm View MSA
121344925 5274 Embryophyte View MSA
123425256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain