Gene : Sevir.3G036900 S. viridis v2.1
Defline:  (1 of 2) K01869 - leucyl-tRNA synthetase (LARS, leuS) Genomic Order:  411
Name:  ? Sevir.3G036900 Secondary Identifier:  ? PAC:40650477
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis TRNA-CHARGING-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G036900 0.5kb upstream 0.5kb upstream 5425 true Chr_03: 2294231-2299655 Setaria viridis
Sevir.3G036900 0.5kb upstream 0.5kb upstream 500 false Chr_03: 2294231-2294730 Setaria viridis
Sevir.3G036900 0.5kb downstream 0.5kb downstream 5425 true Chr_03: 2294731-2300155 Setaria viridis
Sevir.3G036900 0.5kb downstream 0.5kb downstream 500 false Chr_03: 2299656-2300155 Setaria viridis
Sevir.3G036900 1.0kb upstream 1.0kb upstream 5925 true Chr_03: 2293731-2299655 Setaria viridis
Sevir.3G036900 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 2293731-2294730 Setaria viridis
Sevir.3G036900 1.0kb downstream 1.0kb downstream 5925 true Chr_03: 2294731-2300655 Setaria viridis
Sevir.3G036900 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 2299656-2300655 Setaria viridis
Sevir.3G036900 2.0kb upstream 2.0kb upstream 6925 true Chr_03: 2292731-2299655 Setaria viridis
Sevir.3G036900 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 2292731-2294730 Setaria viridis
Sevir.3G036900 2.0kb downstream 2.0kb downstream 6925 true Chr_03: 2294731-2301655 Setaria viridis
Sevir.3G036900 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 2299656-2301655 Setaria viridis
Sevir.3G036900 5.0kb upstream 5.0kb upstream 9925 true Chr_03: 2289731-2299655 Setaria viridis
Sevir.3G036900 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 2289731-2294730 Setaria viridis
Sevir.3G036900 5.0kb downstream 5.0kb downstream 9925 true Chr_03: 2294731-2304655 Setaria viridis
Sevir.3G036900 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 2299656-2304655 Setaria viridis
Sevir.3G036900 10.0kb upstream 10.0kb upstream 14925 true Chr_03: 2284731-2299655 Setaria viridis
Sevir.3G036900 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 2284731-2294730 Setaria viridis
Sevir.3G036900 10.0kb downstream 10.0kb downstream 14925 true Chr_03: 2294731-2309655 Setaria viridis
Sevir.3G036900 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 2299656-2309655 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195247 5267 Panicoideae View MSA
124584532 5269 Grass View MSA
122047618 5273 Angiosperm View MSA
121344832 5274 Embryophyte View MSA
123424388 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain