Gene : Sevir.4G158300 S. viridis v2.1
Defline:  (1 of 3) K10696 - E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] (BRE1) Genomic Order:  2152
Name:  ? Sevir.4G158300 Secondary Identifier:  ? PAC:40599952
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7511 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.4G158300 0.5kb upstream 0.5kb upstream 10101 true Chr_04: 29922430-29932530 Setaria viridis
Sevir.4G158300 0.5kb upstream 0.5kb upstream 500 false Chr_04: 29932031-29932530 Setaria viridis
Sevir.4G158300 0.5kb downstream 0.5kb downstream 10101 true Chr_04: 29921930-29932030 Setaria viridis
Sevir.4G158300 0.5kb downstream 0.5kb downstream 500 false Chr_04: 29921930-29922429 Setaria viridis
Sevir.4G158300 1.0kb upstream 1.0kb upstream 10601 true Chr_04: 29922430-29933030 Setaria viridis
Sevir.4G158300 1.0kb upstream 1.0kb upstream 1000 false Chr_04: 29932031-29933030 Setaria viridis
Sevir.4G158300 1.0kb downstream 1.0kb downstream 10601 true Chr_04: 29921430-29932030 Setaria viridis
Sevir.4G158300 1.0kb downstream 1.0kb downstream 1000 false Chr_04: 29921430-29922429 Setaria viridis
Sevir.4G158300 2.0kb upstream 2.0kb upstream 11601 true Chr_04: 29922430-29934030 Setaria viridis
Sevir.4G158300 2.0kb upstream 2.0kb upstream 2000 false Chr_04: 29932031-29934030 Setaria viridis
Sevir.4G158300 2.0kb downstream 2.0kb downstream 11601 true Chr_04: 29920430-29932030 Setaria viridis
Sevir.4G158300 2.0kb downstream 2.0kb downstream 2000 false Chr_04: 29920430-29922429 Setaria viridis
Sevir.4G158300 5.0kb upstream 5.0kb upstream 14601 true Chr_04: 29922430-29937030 Setaria viridis
Sevir.4G158300 5.0kb upstream 5.0kb upstream 5000 false Chr_04: 29932031-29937030 Setaria viridis
Sevir.4G158300 5.0kb downstream 5.0kb downstream 14601 true Chr_04: 29917430-29932030 Setaria viridis
Sevir.4G158300 5.0kb downstream 5.0kb downstream 5000 false Chr_04: 29917430-29922429 Setaria viridis
Sevir.4G158300 10.0kb upstream 10.0kb upstream 19601 true Chr_04: 29922430-29942030 Setaria viridis
Sevir.4G158300 10.0kb upstream 10.0kb upstream 10000 false Chr_04: 29932031-29942030 Setaria viridis
Sevir.4G158300 10.0kb downstream 10.0kb downstream 19601 true Chr_04: 29912430-29932030 Setaria viridis
Sevir.4G158300 10.0kb downstream 10.0kb downstream 10000 false Chr_04: 29912430-29922429 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189867 5267 Panicoideae View MSA
124570502 5269 Grass View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain