Gene : Sevir.3G214800 S. viridis v2.1
Defline:  (1 of 1) PTHR18968//PTHR18968:SF121 - THIAMINE PYROPHOSPHATE ENZYMES // PYRUVATE DECARBOXYLASE 1-RELATED Genomic Order:  2314
Name:  ? Sevir.3G214800 Secondary Identifier:  ? PAC:40645302
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5486 Setaria viridis pathologic  
Sviridis PWY-6330 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G214800 0.5kb upstream 0.5kb upstream 2976 true Chr_03: 15927029-15930004 Setaria viridis
Sevir.3G214800 0.5kb upstream 0.5kb upstream 500 false Chr_03: 15929505-15930004 Setaria viridis
Sevir.3G214800 0.5kb downstream 0.5kb downstream 2976 true Chr_03: 15926529-15929504 Setaria viridis
Sevir.3G214800 0.5kb downstream 0.5kb downstream 500 false Chr_03: 15926529-15927028 Setaria viridis
Sevir.3G214800 1.0kb upstream 1.0kb upstream 3476 true Chr_03: 15927029-15930504 Setaria viridis
Sevir.3G214800 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 15929505-15930504 Setaria viridis
Sevir.3G214800 1.0kb downstream 1.0kb downstream 3476 true Chr_03: 15926029-15929504 Setaria viridis
Sevir.3G214800 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 15926029-15927028 Setaria viridis
Sevir.3G214800 2.0kb upstream 2.0kb upstream 4476 true Chr_03: 15927029-15931504 Setaria viridis
Sevir.3G214800 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 15929505-15931504 Setaria viridis
Sevir.3G214800 2.0kb downstream 2.0kb downstream 4476 true Chr_03: 15925029-15929504 Setaria viridis
Sevir.3G214800 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 15925029-15927028 Setaria viridis
Sevir.3G214800 5.0kb upstream 5.0kb upstream 7476 true Chr_03: 15927029-15934504 Setaria viridis
Sevir.3G214800 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 15929505-15934504 Setaria viridis
Sevir.3G214800 5.0kb downstream 5.0kb downstream 7476 true Chr_03: 15922029-15929504 Setaria viridis
Sevir.3G214800 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 15922029-15927028 Setaria viridis
Sevir.3G214800 10.0kb upstream 10.0kb upstream 12476 true Chr_03: 15927029-15939504 Setaria viridis
Sevir.3G214800 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 15929505-15939504 Setaria viridis
Sevir.3G214800 10.0kb downstream 10.0kb downstream 12476 true Chr_03: 15917029-15929504 Setaria viridis
Sevir.3G214800 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 15917029-15927028 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191607 5267 Panicoideae View MSA
124575174 5269 Grass View MSA
122042059 5273 Angiosperm View MSA
121351042 5274 Embryophyte View MSA
123426958 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain