Gene : Sevir.3G246500 S. viridis v2.1
Defline:  (1 of 3) PTHR22600//PTHR22600:SF18 - BETA-HEXOSAMINIDASE // SUBFAMILY NOT NAMED Genomic Order:  2653
Name:  ? Sevir.3G246500 Secondary Identifier:  ? PAC:40645457
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-6902 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G246500 0.5kb upstream 0.5kb upstream 5972 true Chr_03: 19504200-19510171 Setaria viridis
Sevir.3G246500 0.5kb upstream 0.5kb upstream 500 false Chr_03: 19509672-19510171 Setaria viridis
Sevir.3G246500 0.5kb downstream 0.5kb downstream 5972 true Chr_03: 19503700-19509671 Setaria viridis
Sevir.3G246500 0.5kb downstream 0.5kb downstream 500 false Chr_03: 19503700-19504199 Setaria viridis
Sevir.3G246500 1.0kb upstream 1.0kb upstream 6472 true Chr_03: 19504200-19510671 Setaria viridis
Sevir.3G246500 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 19509672-19510671 Setaria viridis
Sevir.3G246500 1.0kb downstream 1.0kb downstream 6472 true Chr_03: 19503200-19509671 Setaria viridis
Sevir.3G246500 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 19503200-19504199 Setaria viridis
Sevir.3G246500 2.0kb upstream 2.0kb upstream 7472 true Chr_03: 19504200-19511671 Setaria viridis
Sevir.3G246500 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 19509672-19511671 Setaria viridis
Sevir.3G246500 2.0kb downstream 2.0kb downstream 7472 true Chr_03: 19502200-19509671 Setaria viridis
Sevir.3G246500 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 19502200-19504199 Setaria viridis
Sevir.3G246500 5.0kb upstream 5.0kb upstream 10472 true Chr_03: 19504200-19514671 Setaria viridis
Sevir.3G246500 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 19509672-19514671 Setaria viridis
Sevir.3G246500 5.0kb downstream 5.0kb downstream 10472 true Chr_03: 19499200-19509671 Setaria viridis
Sevir.3G246500 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 19499200-19504199 Setaria viridis
Sevir.3G246500 10.0kb upstream 10.0kb upstream 15472 true Chr_03: 19504200-19519671 Setaria viridis
Sevir.3G246500 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 19509672-19519671 Setaria viridis
Sevir.3G246500 10.0kb downstream 10.0kb downstream 15472 true Chr_03: 19494200-19509671 Setaria viridis
Sevir.3G246500 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 19494200-19504199 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178301 5267 Panicoideae View MSA
124576721 5269 Grass View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain