Gene : Sevir.3G171500 S. viridis v2.1
Defline:  (1 of 2) PTHR23416//PTHR23416:SF67 - SIALIC ACID SYNTHASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1859
Name:  ? Sevir.3G171500 Secondary Identifier:  ? PAC:40650230
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis CYSTSYN-PWY Setaria viridis pathologic  
Sviridis PWY-6936 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G171500 0.5kb upstream 0.5kb upstream 4208 true Chr_03: 12012261-12016468 Setaria viridis
Sevir.3G171500 0.5kb upstream 0.5kb upstream 500 false Chr_03: 12012261-12012760 Setaria viridis
Sevir.3G171500 0.5kb downstream 0.5kb downstream 4208 true Chr_03: 12012761-12016968 Setaria viridis
Sevir.3G171500 0.5kb downstream 0.5kb downstream 500 false Chr_03: 12016469-12016968 Setaria viridis
Sevir.3G171500 1.0kb upstream 1.0kb upstream 4708 true Chr_03: 12011761-12016468 Setaria viridis
Sevir.3G171500 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 12011761-12012760 Setaria viridis
Sevir.3G171500 1.0kb downstream 1.0kb downstream 4708 true Chr_03: 12012761-12017468 Setaria viridis
Sevir.3G171500 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 12016469-12017468 Setaria viridis
Sevir.3G171500 2.0kb upstream 2.0kb upstream 5708 true Chr_03: 12010761-12016468 Setaria viridis
Sevir.3G171500 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 12010761-12012760 Setaria viridis
Sevir.3G171500 2.0kb downstream 2.0kb downstream 5708 true Chr_03: 12012761-12018468 Setaria viridis
Sevir.3G171500 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 12016469-12018468 Setaria viridis
Sevir.3G171500 5.0kb upstream 5.0kb upstream 8708 true Chr_03: 12007761-12016468 Setaria viridis
Sevir.3G171500 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 12007761-12012760 Setaria viridis
Sevir.3G171500 5.0kb downstream 5.0kb downstream 8708 true Chr_03: 12012761-12021468 Setaria viridis
Sevir.3G171500 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 12016469-12021468 Setaria viridis
Sevir.3G171500 10.0kb upstream 10.0kb upstream 13708 true Chr_03: 12002761-12016468 Setaria viridis
Sevir.3G171500 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 12002761-12012760 Setaria viridis
Sevir.3G171500 10.0kb downstream 10.0kb downstream 13708 true Chr_03: 12012761-12026468 Setaria viridis
Sevir.3G171500 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 12016469-12026468 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177076 5267 Panicoideae View MSA
124579116 5269 Grass View MSA
122047158 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain