Gene : Sevir.3G355000 S. viridis v2.1
Defline:  (1 of 2) PTHR11349:SF44 - NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC Genomic Order:  3818
Name:  ? Sevir.3G355000 Secondary Identifier:  ? PAC:40647866
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Sequence Feature Displayer

Ontology Annotation Displayer

17 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY0-162 Setaria viridis pathologic  
Sviridis PWY-7176 Setaria viridis pathologic  
Sviridis PWY-7184 Setaria viridis pathologic  
Sviridis PWY-7196 Setaria viridis pathologic  
Sviridis PWY-7197 Setaria viridis pathologic  
Sviridis PWY-7200 Setaria viridis pathologic  
Sviridis PWY-7205 Setaria viridis pathologic  
Sviridis PWY-7208 Setaria viridis pathologic  
Sviridis PWY-7210 Setaria viridis pathologic  
Sviridis PWY-7211 Setaria viridis pathologic  
Sviridis PWY-7221 Setaria viridis pathologic  
Sviridis PWY-7224 Setaria viridis pathologic  
Sviridis PWY-7226 Setaria viridis pathologic  
Sviridis PWY-7227 Setaria viridis pathologic  
Sviridis PWY-7228 Setaria viridis pathologic  
Sviridis PWY-7229 Setaria viridis pathologic  
Sviridis PWY-841 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G355000 0.5kb upstream 0.5kb upstream 4620 true Chr_03: 43268908-43273527 Setaria viridis
Sevir.3G355000 0.5kb upstream 0.5kb upstream 500 false Chr_03: 43273028-43273527 Setaria viridis
Sevir.3G355000 0.5kb downstream 0.5kb downstream 4620 true Chr_03: 43268408-43273027 Setaria viridis
Sevir.3G355000 0.5kb downstream 0.5kb downstream 500 false Chr_03: 43268408-43268907 Setaria viridis
Sevir.3G355000 1.0kb upstream 1.0kb upstream 5120 true Chr_03: 43268908-43274027 Setaria viridis
Sevir.3G355000 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 43273028-43274027 Setaria viridis
Sevir.3G355000 1.0kb downstream 1.0kb downstream 5120 true Chr_03: 43267908-43273027 Setaria viridis
Sevir.3G355000 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 43267908-43268907 Setaria viridis
Sevir.3G355000 2.0kb upstream 2.0kb upstream 6120 true Chr_03: 43268908-43275027 Setaria viridis
Sevir.3G355000 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 43273028-43275027 Setaria viridis
Sevir.3G355000 2.0kb downstream 2.0kb downstream 6120 true Chr_03: 43266908-43273027 Setaria viridis
Sevir.3G355000 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 43266908-43268907 Setaria viridis
Sevir.3G355000 5.0kb upstream 5.0kb upstream 9120 true Chr_03: 43268908-43278027 Setaria viridis
Sevir.3G355000 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 43273028-43278027 Setaria viridis
Sevir.3G355000 5.0kb downstream 5.0kb downstream 9120 true Chr_03: 43263908-43273027 Setaria viridis
Sevir.3G355000 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 43263908-43268907 Setaria viridis
Sevir.3G355000 10.0kb upstream 10.0kb upstream 14120 true Chr_03: 43268908-43283027 Setaria viridis
Sevir.3G355000 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 43273028-43283027 Setaria viridis
Sevir.3G355000 10.0kb downstream 10.0kb downstream 14120 true Chr_03: 43258908-43273027 Setaria viridis
Sevir.3G355000 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 43258908-43268907 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195967 5267 Panicoideae View MSA
124571700 5269 Grass View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain