Gene : Sevir.3G378400 S. viridis v2.1
Defline:  (1 of 2) PTHR12169:SF6 - LACTATION ELEVATED PROTEIN 1 Genomic Order:  4068
Name:  ? Sevir.3G378400 Secondary Identifier:  ? PAC:40648534
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis ANAEROFRUCAT-PWY Setaria viridis pathologic  
Sviridis ANAGLYCOLYSIS-PWY Setaria viridis pathologic  
Sviridis GLUCOSE1PMETAB-PWY Setaria viridis pathologic  
Sviridis PWY-621 Setaria viridis pathologic  
Sviridis PWY-7238 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G378400 0.5kb upstream 0.5kb upstream 5999 true Chr_03: 46049292-46055290 Setaria viridis
Sevir.3G378400 0.5kb upstream 0.5kb upstream 500 false Chr_03: 46054791-46055290 Setaria viridis
Sevir.3G378400 0.5kb downstream 0.5kb downstream 5999 true Chr_03: 46048792-46054790 Setaria viridis
Sevir.3G378400 0.5kb downstream 0.5kb downstream 500 false Chr_03: 46048792-46049291 Setaria viridis
Sevir.3G378400 1.0kb upstream 1.0kb upstream 6499 true Chr_03: 46049292-46055790 Setaria viridis
Sevir.3G378400 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 46054791-46055790 Setaria viridis
Sevir.3G378400 1.0kb downstream 1.0kb downstream 6499 true Chr_03: 46048292-46054790 Setaria viridis
Sevir.3G378400 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 46048292-46049291 Setaria viridis
Sevir.3G378400 2.0kb upstream 2.0kb upstream 7499 true Chr_03: 46049292-46056790 Setaria viridis
Sevir.3G378400 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 46054791-46056790 Setaria viridis
Sevir.3G378400 2.0kb downstream 2.0kb downstream 7499 true Chr_03: 46047292-46054790 Setaria viridis
Sevir.3G378400 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 46047292-46049291 Setaria viridis
Sevir.3G378400 5.0kb upstream 5.0kb upstream 10499 true Chr_03: 46049292-46059790 Setaria viridis
Sevir.3G378400 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 46054791-46059790 Setaria viridis
Sevir.3G378400 5.0kb downstream 5.0kb downstream 10499 true Chr_03: 46044292-46054790 Setaria viridis
Sevir.3G378400 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 46044292-46049291 Setaria viridis
Sevir.3G378400 10.0kb upstream 10.0kb upstream 15499 true Chr_03: 46049292-46064790 Setaria viridis
Sevir.3G378400 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 46054791-46064790 Setaria viridis
Sevir.3G378400 10.0kb downstream 10.0kb downstream 15499 true Chr_03: 46039292-46054790 Setaria viridis
Sevir.3G378400 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 46039292-46049291 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122066014 5267 Panicoideae View MSA
124365216 5269 Grass View MSA
122047660 5273 Angiosperm View MSA
121344773 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain