Gene : Sevir.3G283600 S. viridis v2.1
Defline:  (1 of 2) PTHR11540//PTHR11540:SF14 - MALATE AND LACTATE DEHYDROGENASE // MALATE DEHYDROGENASE, CHLOROPLASTIC Genomic Order:  3053
Name:  ? Sevir.3G283600 Secondary Identifier:  ? PAC:40650530
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis GLUCONEO-PWY Setaria viridis pathologic  
Sviridis GLYOXYLATE-BYPASS Setaria viridis pathologic  
Sviridis PWY-5464 Setaria viridis pathologic  
Sviridis PWY-561 Setaria viridis pathologic  
Sviridis PWY-5690 Setaria viridis pathologic  
Sviridis PWY-7115 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G283600 0.5kb upstream 0.5kb upstream 2866 true Chr_03: 24153680-24156545 Setaria viridis
Sevir.3G283600 0.5kb upstream 0.5kb upstream 500 false Chr_03: 24153680-24154179 Setaria viridis
Sevir.3G283600 0.5kb downstream 0.5kb downstream 2866 true Chr_03: 24154180-24157045 Setaria viridis
Sevir.3G283600 0.5kb downstream 0.5kb downstream 500 false Chr_03: 24156546-24157045 Setaria viridis
Sevir.3G283600 1.0kb upstream 1.0kb upstream 3366 true Chr_03: 24153180-24156545 Setaria viridis
Sevir.3G283600 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 24153180-24154179 Setaria viridis
Sevir.3G283600 1.0kb downstream 1.0kb downstream 3366 true Chr_03: 24154180-24157545 Setaria viridis
Sevir.3G283600 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 24156546-24157545 Setaria viridis
Sevir.3G283600 2.0kb upstream 2.0kb upstream 4366 true Chr_03: 24152180-24156545 Setaria viridis
Sevir.3G283600 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 24152180-24154179 Setaria viridis
Sevir.3G283600 2.0kb downstream 2.0kb downstream 4366 true Chr_03: 24154180-24158545 Setaria viridis
Sevir.3G283600 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 24156546-24158545 Setaria viridis
Sevir.3G283600 5.0kb upstream 5.0kb upstream 7366 true Chr_03: 24149180-24156545 Setaria viridis
Sevir.3G283600 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 24149180-24154179 Setaria viridis
Sevir.3G283600 5.0kb downstream 5.0kb downstream 7366 true Chr_03: 24154180-24161545 Setaria viridis
Sevir.3G283600 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 24156546-24161545 Setaria viridis
Sevir.3G283600 10.0kb upstream 10.0kb upstream 12366 true Chr_03: 24144180-24156545 Setaria viridis
Sevir.3G283600 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 24144180-24154179 Setaria viridis
Sevir.3G283600 10.0kb downstream 10.0kb downstream 12366 true Chr_03: 24154180-24166545 Setaria viridis
Sevir.3G283600 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 24156546-24166545 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182824 5267 Panicoideae View MSA
124581748 5269 Grass View MSA
122049358 5273 Angiosperm View MSA
121344647 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain