Gene : Sevir.3G276400 S. viridis v2.1
Defline:  (1 of 3) K00949 - thiamine pyrophosphokinase (thiN, TPK1, THI80) Genomic Order:  2974
Name:  ? Sevir.3G276400 Secondary Identifier:  ? PAC:40650472
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-6908 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G276400 0.5kb upstream 0.5kb upstream 3977 true Chr_03: 23074973-23078949 Setaria viridis
Sevir.3G276400 0.5kb upstream 0.5kb upstream 500 false Chr_03: 23074973-23075472 Setaria viridis
Sevir.3G276400 0.5kb downstream 0.5kb downstream 3977 true Chr_03: 23075473-23079449 Setaria viridis
Sevir.3G276400 0.5kb downstream 0.5kb downstream 500 false Chr_03: 23078950-23079449 Setaria viridis
Sevir.3G276400 1.0kb upstream 1.0kb upstream 4477 true Chr_03: 23074473-23078949 Setaria viridis
Sevir.3G276400 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 23074473-23075472 Setaria viridis
Sevir.3G276400 1.0kb downstream 1.0kb downstream 4477 true Chr_03: 23075473-23079949 Setaria viridis
Sevir.3G276400 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 23078950-23079949 Setaria viridis
Sevir.3G276400 2.0kb upstream 2.0kb upstream 5477 true Chr_03: 23073473-23078949 Setaria viridis
Sevir.3G276400 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 23073473-23075472 Setaria viridis
Sevir.3G276400 2.0kb downstream 2.0kb downstream 5477 true Chr_03: 23075473-23080949 Setaria viridis
Sevir.3G276400 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 23078950-23080949 Setaria viridis
Sevir.3G276400 5.0kb upstream 5.0kb upstream 8477 true Chr_03: 23070473-23078949 Setaria viridis
Sevir.3G276400 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 23070473-23075472 Setaria viridis
Sevir.3G276400 5.0kb downstream 5.0kb downstream 8477 true Chr_03: 23075473-23083949 Setaria viridis
Sevir.3G276400 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 23078950-23083949 Setaria viridis
Sevir.3G276400 10.0kb upstream 10.0kb upstream 13477 true Chr_03: 23065473-23078949 Setaria viridis
Sevir.3G276400 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 23065473-23075472 Setaria viridis
Sevir.3G276400 10.0kb downstream 10.0kb downstream 13477 true Chr_03: 23075473-23088949 Setaria viridis
Sevir.3G276400 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 23078950-23088949 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177462 5267 Panicoideae View MSA
124570032 5269 Grass View MSA
122046316 5273 Angiosperm View MSA
121345006 5274 Embryophyte View MSA
123424730 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain