Gene : Sevir.3G310000 S. viridis v2.1
Defline:  (1 of 2) 2.5.1.90 - All-trans-octaprenyl-diphosphate synthase / Trans-prenyltransferase Genomic Order:  3317
Name:  ? Sevir.3G310000 Secondary Identifier:  ? PAC:40649256
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis HEXPPSYN-PWY Setaria viridis pathologic  
Sviridis PWY-5120 Setaria viridis pathologic  
Sviridis PWY-5783 Setaria viridis pathologic  
Sviridis PWY-5805 Setaria viridis pathologic  
Sviridis PWY-5807 Setaria viridis pathologic  
Sviridis PWY-5864 Setaria viridis pathologic  
Sviridis PWY-5910 Setaria viridis pathologic  
Sviridis PWY-6520 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G310000 0.5kb upstream 0.5kb upstream 4877 true Chr_03: 32233466-32238342 Setaria viridis
Sevir.3G310000 0.5kb upstream 0.5kb upstream 500 false Chr_03: 32237843-32238342 Setaria viridis
Sevir.3G310000 0.5kb downstream 0.5kb downstream 4877 true Chr_03: 32232966-32237842 Setaria viridis
Sevir.3G310000 0.5kb downstream 0.5kb downstream 500 false Chr_03: 32232966-32233465 Setaria viridis
Sevir.3G310000 1.0kb upstream 1.0kb upstream 5377 true Chr_03: 32233466-32238842 Setaria viridis
Sevir.3G310000 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 32237843-32238842 Setaria viridis
Sevir.3G310000 1.0kb downstream 1.0kb downstream 5377 true Chr_03: 32232466-32237842 Setaria viridis
Sevir.3G310000 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 32232466-32233465 Setaria viridis
Sevir.3G310000 2.0kb upstream 2.0kb upstream 6377 true Chr_03: 32233466-32239842 Setaria viridis
Sevir.3G310000 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 32237843-32239842 Setaria viridis
Sevir.3G310000 2.0kb downstream 2.0kb downstream 6377 true Chr_03: 32231466-32237842 Setaria viridis
Sevir.3G310000 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 32231466-32233465 Setaria viridis
Sevir.3G310000 5.0kb upstream 5.0kb upstream 9377 true Chr_03: 32233466-32242842 Setaria viridis
Sevir.3G310000 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 32237843-32242842 Setaria viridis
Sevir.3G310000 5.0kb downstream 5.0kb downstream 9377 true Chr_03: 32228466-32237842 Setaria viridis
Sevir.3G310000 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 32228466-32233465 Setaria viridis
Sevir.3G310000 10.0kb upstream 10.0kb upstream 14377 true Chr_03: 32233466-32247842 Setaria viridis
Sevir.3G310000 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 32237843-32247842 Setaria viridis
Sevir.3G310000 10.0kb downstream 10.0kb downstream 14377 true Chr_03: 32223466-32237842 Setaria viridis
Sevir.3G310000 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 32223466-32233465 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041065 5273 Angiosperm View MSA
122182830 5267 Panicoideae View MSA
124570565 5269 Grass View MSA
121345449 5274 Embryophyte View MSA
123424009 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain