Gene : Sevir.4G142402 S. viridis v2.1

Defline:  (1 of 2) K02712 - photosystem II PsbK protein (psbK) Genomic Order:  1979
Name:  ? Sevir.4G142402 Secondary Identifier:  ? PAC:40599166

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.4G142402 0.5kb upstream 0.5kb upstream 830 true Chr_04: 27126670-27127499 Setaria viridis
Sevir.4G142402 0.5kb upstream 0.5kb upstream 500 false Chr_04: 27126670-27127169 Setaria viridis
Sevir.4G142402 0.5kb downstream 0.5kb downstream 830 true Chr_04: 27127170-27127999 Setaria viridis
Sevir.4G142402 0.5kb downstream 0.5kb downstream 500 false Chr_04: 27127500-27127999 Setaria viridis
Sevir.4G142402 1.0kb upstream 1.0kb upstream 1330 true Chr_04: 27126170-27127499 Setaria viridis
Sevir.4G142402 1.0kb upstream 1.0kb upstream 1000 false Chr_04: 27126170-27127169 Setaria viridis
Sevir.4G142402 1.0kb downstream 1.0kb downstream 1330 true Chr_04: 27127170-27128499 Setaria viridis
Sevir.4G142402 1.0kb downstream 1.0kb downstream 1000 false Chr_04: 27127500-27128499 Setaria viridis
Sevir.4G142402 2.0kb upstream 2.0kb upstream 2330 true Chr_04: 27125170-27127499 Setaria viridis
Sevir.4G142402 2.0kb upstream 2.0kb upstream 2000 false Chr_04: 27125170-27127169 Setaria viridis
Sevir.4G142402 2.0kb downstream 2.0kb downstream 2330 true Chr_04: 27127170-27129499 Setaria viridis
Sevir.4G142402 2.0kb downstream 2.0kb downstream 2000 false Chr_04: 27127500-27129499 Setaria viridis
Sevir.4G142402 5.0kb upstream 5.0kb upstream 5330 true Chr_04: 27122170-27127499 Setaria viridis
Sevir.4G142402 5.0kb upstream 5.0kb upstream 5000 false Chr_04: 27122170-27127169 Setaria viridis
Sevir.4G142402 5.0kb downstream 5.0kb downstream 5330 true Chr_04: 27127170-27132499 Setaria viridis
Sevir.4G142402 5.0kb downstream 5.0kb downstream 5000 false Chr_04: 27127500-27132499 Setaria viridis
Sevir.4G142402 10.0kb upstream 10.0kb upstream 10330 true Chr_04: 27117170-27127499 Setaria viridis
Sevir.4G142402 10.0kb upstream 10.0kb upstream 10000 false Chr_04: 27117170-27127169 Setaria viridis
Sevir.4G142402 10.0kb downstream 10.0kb downstream 10330 true Chr_04: 27127170-27137499 Setaria viridis
Sevir.4G142402 10.0kb downstream 10.0kb downstream 10000 false Chr_04: 27127500-27137499 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122006062 5273 Angiosperm View MSA
122117495 5267 Panicoideae View MSA
124411607 5269 Grass View MSA
121276183 5274 Embryophyte View MSA
123314477 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain