Gene : Sevir.4G053602 S. viridis v2.1
Defline:  (1 of 14) PF04195 - Putative gypsy type transposon (Transposase_28) Genomic Order:  610
Name:  ? Sevir.4G053602 Secondary Identifier:  ? PAC:40600745
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.4G053602 0.5kb upstream 0.5kb upstream 2881 true Chr_04: 4160042-4162922 Setaria viridis
Sevir.4G053602 0.5kb upstream 0.5kb upstream 500 false Chr_04: 4160042-4160541 Setaria viridis
Sevir.4G053602 0.5kb downstream 0.5kb downstream 2881 true Chr_04: 4160542-4163422 Setaria viridis
Sevir.4G053602 0.5kb downstream 0.5kb downstream 500 false Chr_04: 4162923-4163422 Setaria viridis
Sevir.4G053602 1.0kb upstream 1.0kb upstream 3381 true Chr_04: 4159542-4162922 Setaria viridis
Sevir.4G053602 1.0kb upstream 1.0kb upstream 1000 false Chr_04: 4159542-4160541 Setaria viridis
Sevir.4G053602 1.0kb downstream 1.0kb downstream 3381 true Chr_04: 4160542-4163922 Setaria viridis
Sevir.4G053602 1.0kb downstream 1.0kb downstream 1000 false Chr_04: 4162923-4163922 Setaria viridis
Sevir.4G053602 2.0kb upstream 2.0kb upstream 4381 true Chr_04: 4158542-4162922 Setaria viridis
Sevir.4G053602 2.0kb upstream 2.0kb upstream 2000 false Chr_04: 4158542-4160541 Setaria viridis
Sevir.4G053602 2.0kb downstream 2.0kb downstream 4381 true Chr_04: 4160542-4164922 Setaria viridis
Sevir.4G053602 2.0kb downstream 2.0kb downstream 2000 false Chr_04: 4162923-4164922 Setaria viridis
Sevir.4G053602 5.0kb upstream 5.0kb upstream 7381 true Chr_04: 4155542-4162922 Setaria viridis
Sevir.4G053602 5.0kb upstream 5.0kb upstream 5000 false Chr_04: 4155542-4160541 Setaria viridis
Sevir.4G053602 5.0kb downstream 5.0kb downstream 7381 true Chr_04: 4160542-4167922 Setaria viridis
Sevir.4G053602 5.0kb downstream 5.0kb downstream 5000 false Chr_04: 4162923-4167922 Setaria viridis
Sevir.4G053602 10.0kb upstream 10.0kb upstream 12381 true Chr_04: 4150542-4162922 Setaria viridis
Sevir.4G053602 10.0kb upstream 10.0kb upstream 10000 false Chr_04: 4150542-4160541 Setaria viridis
Sevir.4G053602 10.0kb downstream 10.0kb downstream 12381 true Chr_04: 4160542-4172922 Setaria viridis
Sevir.4G053602 10.0kb downstream 10.0kb downstream 10000 false Chr_04: 4162923-4172922 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121995681 5273 Angiosperm View MSA
122194106 5267 Panicoideae View MSA
124589230 5269 Grass View MSA
121265867 5274 Embryophyte View MSA
123304229 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain