Gene : Sevir.3G425500 S. viridis v2.1
Defline:  (1 of 3) 1.1.5.2 - Quinoprotein glucose dehydrogenase (PQQ, quinone) / Quinoprotein D-glucose dehydrogenase Genomic Order:  4589
Name:  ? Sevir.3G425500 Secondary Identifier:  ? PAC:40650221
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis GLUCOSE1PMETAB-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G425500 0.5kb upstream 0.5kb upstream 5597 true Chr_03: 50185568-50191164 Setaria viridis
Sevir.3G425500 0.5kb upstream 0.5kb upstream 500 false Chr_03: 50185568-50186067 Setaria viridis
Sevir.3G425500 0.5kb downstream 0.5kb downstream 5597 true Chr_03: 50186068-50191664 Setaria viridis
Sevir.3G425500 0.5kb downstream 0.5kb downstream 500 false Chr_03: 50191165-50191664 Setaria viridis
Sevir.3G425500 1.0kb upstream 1.0kb upstream 6097 true Chr_03: 50185068-50191164 Setaria viridis
Sevir.3G425500 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 50185068-50186067 Setaria viridis
Sevir.3G425500 1.0kb downstream 1.0kb downstream 6097 true Chr_03: 50186068-50192164 Setaria viridis
Sevir.3G425500 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 50191165-50192164 Setaria viridis
Sevir.3G425500 2.0kb upstream 2.0kb upstream 7097 true Chr_03: 50184068-50191164 Setaria viridis
Sevir.3G425500 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 50184068-50186067 Setaria viridis
Sevir.3G425500 2.0kb downstream 2.0kb downstream 7097 true Chr_03: 50186068-50193164 Setaria viridis
Sevir.3G425500 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 50191165-50193164 Setaria viridis
Sevir.3G425500 5.0kb upstream 5.0kb upstream 10097 true Chr_03: 50181068-50191164 Setaria viridis
Sevir.3G425500 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 50181068-50186067 Setaria viridis
Sevir.3G425500 5.0kb downstream 5.0kb downstream 10097 true Chr_03: 50186068-50196164 Setaria viridis
Sevir.3G425500 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 50191165-50196164 Setaria viridis
Sevir.3G425500 10.0kb upstream 10.0kb upstream 15097 true Chr_03: 50176068-50191164 Setaria viridis
Sevir.3G425500 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 50176068-50186067 Setaria viridis
Sevir.3G425500 10.0kb downstream 10.0kb downstream 15097 true Chr_03: 50186068-50201164 Setaria viridis
Sevir.3G425500 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 50191165-50201164 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175209 5267 Panicoideae View MSA
124580161 5269 Grass View MSA
122045052 5273 Angiosperm View MSA
121344764 5274 Embryophyte View MSA
123380098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain