Gene : Sevir.3G423500 S. viridis v2.1
Defline:  (1 of 4) PTHR22953//PTHR22953:SF29 - ACID PHOSPHATASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  4568
Name:  ? Sevir.3G423500 Secondary Identifier:  ? PAC:40647719
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5083 Setaria viridis pathologic  
Sviridis PWY-6348 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G423500 0.5kb upstream 0.5kb upstream 3590 true Chr_03: 50035707-50039296 Setaria viridis
Sevir.3G423500 0.5kb upstream 0.5kb upstream 500 false Chr_03: 50038797-50039296 Setaria viridis
Sevir.3G423500 0.5kb downstream 0.5kb downstream 3590 true Chr_03: 50035207-50038796 Setaria viridis
Sevir.3G423500 0.5kb downstream 0.5kb downstream 500 false Chr_03: 50035207-50035706 Setaria viridis
Sevir.3G423500 1.0kb upstream 1.0kb upstream 4090 true Chr_03: 50035707-50039796 Setaria viridis
Sevir.3G423500 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 50038797-50039796 Setaria viridis
Sevir.3G423500 1.0kb downstream 1.0kb downstream 4090 true Chr_03: 50034707-50038796 Setaria viridis
Sevir.3G423500 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 50034707-50035706 Setaria viridis
Sevir.3G423500 2.0kb upstream 2.0kb upstream 5090 true Chr_03: 50035707-50040796 Setaria viridis
Sevir.3G423500 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 50038797-50040796 Setaria viridis
Sevir.3G423500 2.0kb downstream 2.0kb downstream 5090 true Chr_03: 50033707-50038796 Setaria viridis
Sevir.3G423500 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 50033707-50035706 Setaria viridis
Sevir.3G423500 5.0kb upstream 5.0kb upstream 8090 true Chr_03: 50035707-50043796 Setaria viridis
Sevir.3G423500 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 50038797-50043796 Setaria viridis
Sevir.3G423500 5.0kb downstream 5.0kb downstream 8090 true Chr_03: 50030707-50038796 Setaria viridis
Sevir.3G423500 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 50030707-50035706 Setaria viridis
Sevir.3G423500 10.0kb upstream 10.0kb upstream 13090 true Chr_03: 50035707-50048796 Setaria viridis
Sevir.3G423500 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 50038797-50048796 Setaria viridis
Sevir.3G423500 10.0kb downstream 10.0kb downstream 13090 true Chr_03: 50025707-50038796 Setaria viridis
Sevir.3G423500 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 50025707-50035706 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993093 5273 Angiosperm View MSA
122184581 5267 Panicoideae View MSA
124574871 5269 Grass View MSA
121351600 5274 Embryophyte View MSA
123426131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain