Gene : Sevir.8G105100 S. viridis v2.1
Defline:  (1 of 3) K17913 - carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase (CCD8) Genomic Order:  1174
Name:  ? Sevir.8G105100 Secondary Identifier:  ? PAC:40636648
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7101 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.8G105100 0.5kb upstream 0.5kb upstream 9090 true Chr_08: 13242563-13251652 Setaria viridis
Sevir.8G105100 0.5kb upstream 0.5kb upstream 500 false Chr_08: 13242563-13243062 Setaria viridis
Sevir.8G105100 0.5kb downstream 0.5kb downstream 9090 true Chr_08: 13243063-13252152 Setaria viridis
Sevir.8G105100 0.5kb downstream 0.5kb downstream 500 false Chr_08: 13251653-13252152 Setaria viridis
Sevir.8G105100 1.0kb upstream 1.0kb upstream 9590 true Chr_08: 13242063-13251652 Setaria viridis
Sevir.8G105100 1.0kb upstream 1.0kb upstream 1000 false Chr_08: 13242063-13243062 Setaria viridis
Sevir.8G105100 1.0kb downstream 1.0kb downstream 9590 true Chr_08: 13243063-13252652 Setaria viridis
Sevir.8G105100 1.0kb downstream 1.0kb downstream 1000 false Chr_08: 13251653-13252652 Setaria viridis
Sevir.8G105100 2.0kb upstream 2.0kb upstream 10590 true Chr_08: 13241063-13251652 Setaria viridis
Sevir.8G105100 2.0kb upstream 2.0kb upstream 2000 false Chr_08: 13241063-13243062 Setaria viridis
Sevir.8G105100 2.0kb downstream 2.0kb downstream 10590 true Chr_08: 13243063-13253652 Setaria viridis
Sevir.8G105100 2.0kb downstream 2.0kb downstream 2000 false Chr_08: 13251653-13253652 Setaria viridis
Sevir.8G105100 5.0kb upstream 5.0kb upstream 13590 true Chr_08: 13238063-13251652 Setaria viridis
Sevir.8G105100 5.0kb upstream 5.0kb upstream 5000 false Chr_08: 13238063-13243062 Setaria viridis
Sevir.8G105100 5.0kb downstream 5.0kb downstream 13590 true Chr_08: 13243063-13256652 Setaria viridis
Sevir.8G105100 5.0kb downstream 5.0kb downstream 5000 false Chr_08: 13251653-13256652 Setaria viridis
Sevir.8G105100 10.0kb upstream 10.0kb upstream 18590 true Chr_08: 13233063-13251652 Setaria viridis
Sevir.8G105100 10.0kb upstream 10.0kb upstream 10000 false Chr_08: 13233063-13243062 Setaria viridis
Sevir.8G105100 10.0kb downstream 10.0kb downstream 18590 true Chr_08: 13243063-13261652 Setaria viridis
Sevir.8G105100 10.0kb downstream 10.0kb downstream 10000 false Chr_08: 13251653-13261652 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181235 5267 Panicoideae View MSA
124587364 5269 Grass View MSA
122048984 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344649 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain