Gene : Sevir.8G015000 S. viridis v2.1

Defline:  (1 of 87) K10523 - speckle-type POZ protein (SPOP) Genomic Order:  194
Name:  ? Sevir.8G015000 Secondary Identifier:  ? PAC:40637893

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.8G015000 0.5kb upstream 0.5kb upstream 2335 true Chr_08: 1039906-1042240 Setaria viridis
Sevir.8G015000 0.5kb upstream 0.5kb upstream 500 false Chr_08: 1039906-1040405 Setaria viridis
Sevir.8G015000 0.5kb downstream 0.5kb downstream 2335 true Chr_08: 1040406-1042740 Setaria viridis
Sevir.8G015000 0.5kb downstream 0.5kb downstream 500 false Chr_08: 1042241-1042740 Setaria viridis
Sevir.8G015000 1.0kb upstream 1.0kb upstream 2835 true Chr_08: 1039406-1042240 Setaria viridis
Sevir.8G015000 1.0kb upstream 1.0kb upstream 1000 false Chr_08: 1039406-1040405 Setaria viridis
Sevir.8G015000 1.0kb downstream 1.0kb downstream 2835 true Chr_08: 1040406-1043240 Setaria viridis
Sevir.8G015000 1.0kb downstream 1.0kb downstream 1000 false Chr_08: 1042241-1043240 Setaria viridis
Sevir.8G015000 2.0kb upstream 2.0kb upstream 3835 true Chr_08: 1038406-1042240 Setaria viridis
Sevir.8G015000 2.0kb upstream 2.0kb upstream 2000 false Chr_08: 1038406-1040405 Setaria viridis
Sevir.8G015000 2.0kb downstream 2.0kb downstream 3835 true Chr_08: 1040406-1044240 Setaria viridis
Sevir.8G015000 2.0kb downstream 2.0kb downstream 2000 false Chr_08: 1042241-1044240 Setaria viridis
Sevir.8G015000 5.0kb upstream 5.0kb upstream 6835 true Chr_08: 1035406-1042240 Setaria viridis
Sevir.8G015000 5.0kb upstream 5.0kb upstream 5000 false Chr_08: 1035406-1040405 Setaria viridis
Sevir.8G015000 5.0kb downstream 5.0kb downstream 6835 true Chr_08: 1040406-1047240 Setaria viridis
Sevir.8G015000 5.0kb downstream 5.0kb downstream 5000 false Chr_08: 1042241-1047240 Setaria viridis
Sevir.8G015000 10.0kb upstream 10.0kb upstream 11835 true Chr_08: 1030406-1042240 Setaria viridis
Sevir.8G015000 10.0kb upstream 10.0kb upstream 10000 false Chr_08: 1030406-1040405 Setaria viridis
Sevir.8G015000 10.0kb downstream 10.0kb downstream 11835 true Chr_08: 1040406-1052240 Setaria viridis
Sevir.8G015000 10.0kb downstream 10.0kb downstream 10000 false Chr_08: 1042241-1052240 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198304 5267 Panicoideae View MSA
124576240 5269 Grass View MSA
122047536 5273 Angiosperm View MSA
123429159 5275 Viridiplantae View MSA
121351417 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain