Gene : Sevir.6G058200 S. viridis v2.1
Defline:  (1 of 1) PTHR12358//PTHR12358:SF37 - SPHINGOSINE KINASE // SUBFAMILY NOT NAMED Genomic Order:  689
Name:  ? Sevir.6G058200 Secondary Identifier:  ? PAC:40618388
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5129 Setaria viridis pathologic  
Sviridis PWY-6483 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G058200 0.5kb upstream 0.5kb upstream 5656 true Chr_06: 5077241-5082896 Setaria viridis
Sevir.6G058200 0.5kb upstream 0.5kb upstream 500 false Chr_06: 5082397-5082896 Setaria viridis
Sevir.6G058200 0.5kb downstream 0.5kb downstream 5656 true Chr_06: 5076741-5082396 Setaria viridis
Sevir.6G058200 0.5kb downstream 0.5kb downstream 500 false Chr_06: 5076741-5077240 Setaria viridis
Sevir.6G058200 1.0kb upstream 1.0kb upstream 6156 true Chr_06: 5077241-5083396 Setaria viridis
Sevir.6G058200 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 5082397-5083396 Setaria viridis
Sevir.6G058200 1.0kb downstream 1.0kb downstream 6156 true Chr_06: 5076241-5082396 Setaria viridis
Sevir.6G058200 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 5076241-5077240 Setaria viridis
Sevir.6G058200 2.0kb upstream 2.0kb upstream 7156 true Chr_06: 5077241-5084396 Setaria viridis
Sevir.6G058200 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 5082397-5084396 Setaria viridis
Sevir.6G058200 2.0kb downstream 2.0kb downstream 7156 true Chr_06: 5075241-5082396 Setaria viridis
Sevir.6G058200 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 5075241-5077240 Setaria viridis
Sevir.6G058200 5.0kb upstream 5.0kb upstream 10156 true Chr_06: 5077241-5087396 Setaria viridis
Sevir.6G058200 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 5082397-5087396 Setaria viridis
Sevir.6G058200 5.0kb downstream 5.0kb downstream 10156 true Chr_06: 5072241-5082396 Setaria viridis
Sevir.6G058200 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 5072241-5077240 Setaria viridis
Sevir.6G058200 10.0kb upstream 10.0kb upstream 15156 true Chr_06: 5077241-5092396 Setaria viridis
Sevir.6G058200 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 5082397-5092396 Setaria viridis
Sevir.6G058200 10.0kb downstream 10.0kb downstream 15156 true Chr_06: 5067241-5082396 Setaria viridis
Sevir.6G058200 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 5067241-5077240 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189104 5267 Panicoideae View MSA
124583970 5269 Grass View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain