Gene : Sevir.6G056900 S. viridis v2.1
Defline:  (1 of 1) PTHR10509//PTHR10509:SF27 - O-METHYLTRANSFERASE-RELATED // PROTEIN COMT-1 Genomic Order:  675
Name:  ? Sevir.6G056900 Secondary Identifier:  ? PAC:40621063
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-1121 Setaria viridis pathologic  
Sviridis PWY-361 Setaria viridis pathologic  
Sviridis PWY-7498 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G056900 0.5kb upstream 0.5kb upstream 4283 true Chr_06: 4959625-4963907 Setaria viridis
Sevir.6G056900 0.5kb upstream 0.5kb upstream 500 false Chr_06: 4963408-4963907 Setaria viridis
Sevir.6G056900 0.5kb downstream 0.5kb downstream 4283 true Chr_06: 4959125-4963407 Setaria viridis
Sevir.6G056900 0.5kb downstream 0.5kb downstream 500 false Chr_06: 4959125-4959624 Setaria viridis
Sevir.6G056900 1.0kb upstream 1.0kb upstream 4783 true Chr_06: 4959625-4964407 Setaria viridis
Sevir.6G056900 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 4963408-4964407 Setaria viridis
Sevir.6G056900 1.0kb downstream 1.0kb downstream 4783 true Chr_06: 4958625-4963407 Setaria viridis
Sevir.6G056900 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 4958625-4959624 Setaria viridis
Sevir.6G056900 2.0kb upstream 2.0kb upstream 5783 true Chr_06: 4959625-4965407 Setaria viridis
Sevir.6G056900 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 4963408-4965407 Setaria viridis
Sevir.6G056900 2.0kb downstream 2.0kb downstream 5783 true Chr_06: 4957625-4963407 Setaria viridis
Sevir.6G056900 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 4957625-4959624 Setaria viridis
Sevir.6G056900 5.0kb upstream 5.0kb upstream 8783 true Chr_06: 4959625-4968407 Setaria viridis
Sevir.6G056900 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 4963408-4968407 Setaria viridis
Sevir.6G056900 5.0kb downstream 5.0kb downstream 8783 true Chr_06: 4954625-4963407 Setaria viridis
Sevir.6G056900 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 4954625-4959624 Setaria viridis
Sevir.6G056900 10.0kb upstream 10.0kb upstream 13783 true Chr_06: 4959625-4973407 Setaria viridis
Sevir.6G056900 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 4963408-4973407 Setaria viridis
Sevir.6G056900 10.0kb downstream 10.0kb downstream 13783 true Chr_06: 4949625-4963407 Setaria viridis
Sevir.6G056900 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 4949625-4959624 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175186 5267 Panicoideae View MSA
124588740 5269 Grass View MSA
122046584 5273 Angiosperm View MSA
121345424 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain