Gene : Sevir.6G056700 S. viridis v2.1
Defline:  (1 of 1) PTHR10683//PTHR10683:SF10 - TRANSALDOLASE // TRANSALDOLASE-LIKE PROTEIN Genomic Order:  673
Name:  ? Sevir.6G056700 Secondary Identifier:  ? PAC:40619490
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis NONOXIPENT-PWY Setaria viridis pathologic  
Sviridis PENTOSE-P-PWY Setaria viridis pathologic  
Sviridis PWY-5723 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G056700 0.5kb upstream 0.5kb upstream 5482 true Chr_06: 4946967-4952448 Setaria viridis
Sevir.6G056700 0.5kb upstream 0.5kb upstream 500 false Chr_06: 4946967-4947466 Setaria viridis
Sevir.6G056700 0.5kb downstream 0.5kb downstream 5482 true Chr_06: 4947467-4952948 Setaria viridis
Sevir.6G056700 0.5kb downstream 0.5kb downstream 500 false Chr_06: 4952449-4952948 Setaria viridis
Sevir.6G056700 1.0kb upstream 1.0kb upstream 5982 true Chr_06: 4946467-4952448 Setaria viridis
Sevir.6G056700 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 4946467-4947466 Setaria viridis
Sevir.6G056700 1.0kb downstream 1.0kb downstream 5982 true Chr_06: 4947467-4953448 Setaria viridis
Sevir.6G056700 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 4952449-4953448 Setaria viridis
Sevir.6G056700 2.0kb upstream 2.0kb upstream 6982 true Chr_06: 4945467-4952448 Setaria viridis
Sevir.6G056700 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 4945467-4947466 Setaria viridis
Sevir.6G056700 2.0kb downstream 2.0kb downstream 6982 true Chr_06: 4947467-4954448 Setaria viridis
Sevir.6G056700 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 4952449-4954448 Setaria viridis
Sevir.6G056700 5.0kb upstream 5.0kb upstream 9982 true Chr_06: 4942467-4952448 Setaria viridis
Sevir.6G056700 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 4942467-4947466 Setaria viridis
Sevir.6G056700 5.0kb downstream 5.0kb downstream 9982 true Chr_06: 4947467-4957448 Setaria viridis
Sevir.6G056700 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 4952449-4957448 Setaria viridis
Sevir.6G056700 10.0kb upstream 10.0kb upstream 14982 true Chr_06: 4937467-4952448 Setaria viridis
Sevir.6G056700 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 4937467-4947466 Setaria viridis
Sevir.6G056700 10.0kb downstream 10.0kb downstream 14982 true Chr_06: 4947467-4962448 Setaria viridis
Sevir.6G056700 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 4952449-4962448 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175204 5267 Panicoideae View MSA
124569843 5269 Grass View MSA
122043979 5273 Angiosperm View MSA
121346789 5274 Embryophyte View MSA
123424119 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain