Gene : Sevir.6G021300 S. viridis v2.1
Defline:  (1 of 1) PTHR11764//PTHR11764:SF17 - LANOSTEROL SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  239
Name:  ? Sevir.6G021300 Secondary Identifier:  ? PAC:40621084
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-2541 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G021300 0.5kb upstream 0.5kb upstream 9222 true Chr_06: 1531413-1540634 Setaria viridis
Sevir.6G021300 0.5kb upstream 0.5kb upstream 500 false Chr_06: 1540135-1540634 Setaria viridis
Sevir.6G021300 0.5kb downstream 0.5kb downstream 9222 true Chr_06: 1530913-1540134 Setaria viridis
Sevir.6G021300 0.5kb downstream 0.5kb downstream 500 false Chr_06: 1530913-1531412 Setaria viridis
Sevir.6G021300 1.0kb upstream 1.0kb upstream 9722 true Chr_06: 1531413-1541134 Setaria viridis
Sevir.6G021300 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 1540135-1541134 Setaria viridis
Sevir.6G021300 1.0kb downstream 1.0kb downstream 9722 true Chr_06: 1530413-1540134 Setaria viridis
Sevir.6G021300 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 1530413-1531412 Setaria viridis
Sevir.6G021300 2.0kb upstream 2.0kb upstream 10722 true Chr_06: 1531413-1542134 Setaria viridis
Sevir.6G021300 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 1540135-1542134 Setaria viridis
Sevir.6G021300 2.0kb downstream 2.0kb downstream 10722 true Chr_06: 1529413-1540134 Setaria viridis
Sevir.6G021300 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 1529413-1531412 Setaria viridis
Sevir.6G021300 5.0kb upstream 5.0kb upstream 13722 true Chr_06: 1531413-1545134 Setaria viridis
Sevir.6G021300 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 1540135-1545134 Setaria viridis
Sevir.6G021300 5.0kb downstream 5.0kb downstream 13722 true Chr_06: 1526413-1540134 Setaria viridis
Sevir.6G021300 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 1526413-1531412 Setaria viridis
Sevir.6G021300 10.0kb upstream 10.0kb upstream 18722 true Chr_06: 1531413-1550134 Setaria viridis
Sevir.6G021300 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 1540135-1550134 Setaria viridis
Sevir.6G021300 10.0kb downstream 10.0kb downstream 18722 true Chr_06: 1521413-1540134 Setaria viridis
Sevir.6G021300 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 1521413-1531412 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028235 5273 Angiosperm View MSA
122181444 5267 Panicoideae View MSA
124581907 5269 Grass View MSA
121297756 5274 Embryophyte View MSA
123335781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain