Gene : Sevir.7G254200 S. viridis v2.1
Defline:  (1 of 1) PTHR10742:SF238 - POLYAMINE OXIDASE 3-RELATED Genomic Order:  2743
Name:  ? Sevir.7G254200 Secondary Identifier:  ? PAC:40641550
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-6441 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.7G254200 0.5kb upstream 0.5kb upstream 6074 true Chr_07: 29478942-29485015 Setaria viridis
Sevir.7G254200 0.5kb upstream 0.5kb upstream 500 false Chr_07: 29484516-29485015 Setaria viridis
Sevir.7G254200 0.5kb downstream 0.5kb downstream 6074 true Chr_07: 29478442-29484515 Setaria viridis
Sevir.7G254200 0.5kb downstream 0.5kb downstream 500 false Chr_07: 29478442-29478941 Setaria viridis
Sevir.7G254200 1.0kb upstream 1.0kb upstream 6574 true Chr_07: 29478942-29485515 Setaria viridis
Sevir.7G254200 1.0kb upstream 1.0kb upstream 1000 false Chr_07: 29484516-29485515 Setaria viridis
Sevir.7G254200 1.0kb downstream 1.0kb downstream 6574 true Chr_07: 29477942-29484515 Setaria viridis
Sevir.7G254200 1.0kb downstream 1.0kb downstream 1000 false Chr_07: 29477942-29478941 Setaria viridis
Sevir.7G254200 2.0kb upstream 2.0kb upstream 7574 true Chr_07: 29478942-29486515 Setaria viridis
Sevir.7G254200 2.0kb upstream 2.0kb upstream 2000 false Chr_07: 29484516-29486515 Setaria viridis
Sevir.7G254200 2.0kb downstream 2.0kb downstream 7574 true Chr_07: 29476942-29484515 Setaria viridis
Sevir.7G254200 2.0kb downstream 2.0kb downstream 2000 false Chr_07: 29476942-29478941 Setaria viridis
Sevir.7G254200 5.0kb upstream 5.0kb upstream 10574 true Chr_07: 29478942-29489515 Setaria viridis
Sevir.7G254200 5.0kb upstream 5.0kb upstream 5000 false Chr_07: 29484516-29489515 Setaria viridis
Sevir.7G254200 5.0kb downstream 5.0kb downstream 10574 true Chr_07: 29473942-29484515 Setaria viridis
Sevir.7G254200 5.0kb downstream 5.0kb downstream 5000 false Chr_07: 29473942-29478941 Setaria viridis
Sevir.7G254200 10.0kb upstream 10.0kb upstream 15574 true Chr_07: 29478942-29494515 Setaria viridis
Sevir.7G254200 10.0kb upstream 10.0kb upstream 10000 false Chr_07: 29484516-29494515 Setaria viridis
Sevir.7G254200 10.0kb downstream 10.0kb downstream 15574 true Chr_07: 29468942-29484515 Setaria viridis
Sevir.7G254200 10.0kb downstream 10.0kb downstream 10000 false Chr_07: 29468942-29478941 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191438 5267 Panicoideae View MSA
124574337 5269 Grass View MSA
122044597 5273 Angiosperm View MSA
121345919 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain