Gene : Sevir.6G108300 S. viridis v2.1
Defline:  (1 of 2) PTHR12169:SF6 - LACTATION ELEVATED PROTEIN 1 Genomic Order:  1169
Name:  ? Sevir.6G108300 Secondary Identifier:  ? PAC:40621157
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis ANAEROFRUCAT-PWY Setaria viridis pathologic  
Sviridis ANAGLYCOLYSIS-PWY Setaria viridis pathologic  
Sviridis GLUCOSE1PMETAB-PWY Setaria viridis pathologic  
Sviridis PWY-621 Setaria viridis pathologic  
Sviridis PWY-7238 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G108300 0.5kb upstream 0.5kb upstream 7440 true Chr_06: 11868584-11876023 Setaria viridis
Sevir.6G108300 0.5kb upstream 0.5kb upstream 500 false Chr_06: 11868584-11869083 Setaria viridis
Sevir.6G108300 0.5kb downstream 0.5kb downstream 7440 true Chr_06: 11869084-11876523 Setaria viridis
Sevir.6G108300 0.5kb downstream 0.5kb downstream 500 false Chr_06: 11876024-11876523 Setaria viridis
Sevir.6G108300 1.0kb upstream 1.0kb upstream 7940 true Chr_06: 11868084-11876023 Setaria viridis
Sevir.6G108300 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 11868084-11869083 Setaria viridis
Sevir.6G108300 1.0kb downstream 1.0kb downstream 7940 true Chr_06: 11869084-11877023 Setaria viridis
Sevir.6G108300 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 11876024-11877023 Setaria viridis
Sevir.6G108300 2.0kb upstream 2.0kb upstream 8940 true Chr_06: 11867084-11876023 Setaria viridis
Sevir.6G108300 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 11867084-11869083 Setaria viridis
Sevir.6G108300 2.0kb downstream 2.0kb downstream 8940 true Chr_06: 11869084-11878023 Setaria viridis
Sevir.6G108300 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 11876024-11878023 Setaria viridis
Sevir.6G108300 5.0kb upstream 5.0kb upstream 11940 true Chr_06: 11864084-11876023 Setaria viridis
Sevir.6G108300 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 11864084-11869083 Setaria viridis
Sevir.6G108300 5.0kb downstream 5.0kb downstream 11940 true Chr_06: 11869084-11881023 Setaria viridis
Sevir.6G108300 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 11876024-11881023 Setaria viridis
Sevir.6G108300 10.0kb upstream 10.0kb upstream 16940 true Chr_06: 11859084-11876023 Setaria viridis
Sevir.6G108300 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 11859084-11869083 Setaria viridis
Sevir.6G108300 10.0kb downstream 10.0kb downstream 16940 true Chr_06: 11869084-11886023 Setaria viridis
Sevir.6G108300 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 11876024-11886023 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194272 5267 Panicoideae View MSA
124577814 5269 Grass View MSA
122047660 5273 Angiosperm View MSA
121344773 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain