Gene : Sevir.6G134800 S. viridis v2.1
Defline:  (1 of 1) PTHR31846:SF10 - CHLOROPLASTIC GROUP IIA INTRON SPLICING FACILITATOR CRS1, CHLOROPLASTIC Genomic Order:  1461
Name:  ? Sevir.6G134800 Secondary Identifier:  ? PAC:40621469
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G134800 0.5kb upstream 0.5kb upstream 5130 true Chr_06: 22490302-22495431 Setaria viridis
Sevir.6G134800 0.5kb upstream 0.5kb upstream 500 false Chr_06: 22494932-22495431 Setaria viridis
Sevir.6G134800 0.5kb downstream 0.5kb downstream 5130 true Chr_06: 22489802-22494931 Setaria viridis
Sevir.6G134800 0.5kb downstream 0.5kb downstream 500 false Chr_06: 22489802-22490301 Setaria viridis
Sevir.6G134800 1.0kb upstream 1.0kb upstream 5630 true Chr_06: 22490302-22495931 Setaria viridis
Sevir.6G134800 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 22494932-22495931 Setaria viridis
Sevir.6G134800 1.0kb downstream 1.0kb downstream 5630 true Chr_06: 22489302-22494931 Setaria viridis
Sevir.6G134800 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 22489302-22490301 Setaria viridis
Sevir.6G134800 2.0kb upstream 2.0kb upstream 6630 true Chr_06: 22490302-22496931 Setaria viridis
Sevir.6G134800 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 22494932-22496931 Setaria viridis
Sevir.6G134800 2.0kb downstream 2.0kb downstream 6630 true Chr_06: 22488302-22494931 Setaria viridis
Sevir.6G134800 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 22488302-22490301 Setaria viridis
Sevir.6G134800 5.0kb upstream 5.0kb upstream 9630 true Chr_06: 22490302-22499931 Setaria viridis
Sevir.6G134800 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 22494932-22499931 Setaria viridis
Sevir.6G134800 5.0kb downstream 5.0kb downstream 9630 true Chr_06: 22485302-22494931 Setaria viridis
Sevir.6G134800 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 22485302-22490301 Setaria viridis
Sevir.6G134800 10.0kb upstream 10.0kb upstream 14630 true Chr_06: 22490302-22504931 Setaria viridis
Sevir.6G134800 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 22494932-22504931 Setaria viridis
Sevir.6G134800 10.0kb downstream 10.0kb downstream 14630 true Chr_06: 22480302-22494931 Setaria viridis
Sevir.6G134800 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 22480302-22490301 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184128 5267 Panicoideae View MSA
124569221 5269 Grass View MSA
122046600 5273 Angiosperm View MSA
121310632 5274 Embryophyte View MSA
123348066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain