Gene : Sevir.6G149900 S. viridis v2.1
Defline:  (1 of 1) 1.17.7.2 - 7-hydroxymethyl chlorophyll a reductase Genomic Order:  1694
Name:  ? Sevir.6G149900 Secondary Identifier:  ? PAC:40620463
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5068 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G149900 0.5kb upstream 0.5kb upstream 5034 true Chr_06: 26474027-26479060 Setaria viridis
Sevir.6G149900 0.5kb upstream 0.5kb upstream 500 false Chr_06: 26478561-26479060 Setaria viridis
Sevir.6G149900 0.5kb downstream 0.5kb downstream 5034 true Chr_06: 26473527-26478560 Setaria viridis
Sevir.6G149900 0.5kb downstream 0.5kb downstream 500 false Chr_06: 26473527-26474026 Setaria viridis
Sevir.6G149900 1.0kb upstream 1.0kb upstream 5534 true Chr_06: 26474027-26479560 Setaria viridis
Sevir.6G149900 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 26478561-26479560 Setaria viridis
Sevir.6G149900 1.0kb downstream 1.0kb downstream 5534 true Chr_06: 26473027-26478560 Setaria viridis
Sevir.6G149900 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 26473027-26474026 Setaria viridis
Sevir.6G149900 2.0kb upstream 2.0kb upstream 6534 true Chr_06: 26474027-26480560 Setaria viridis
Sevir.6G149900 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 26478561-26480560 Setaria viridis
Sevir.6G149900 2.0kb downstream 2.0kb downstream 6534 true Chr_06: 26472027-26478560 Setaria viridis
Sevir.6G149900 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 26472027-26474026 Setaria viridis
Sevir.6G149900 5.0kb upstream 5.0kb upstream 9534 true Chr_06: 26474027-26483560 Setaria viridis
Sevir.6G149900 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 26478561-26483560 Setaria viridis
Sevir.6G149900 5.0kb downstream 5.0kb downstream 9534 true Chr_06: 26469027-26478560 Setaria viridis
Sevir.6G149900 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 26469027-26474026 Setaria viridis
Sevir.6G149900 10.0kb upstream 10.0kb upstream 14534 true Chr_06: 26474027-26488560 Setaria viridis
Sevir.6G149900 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 26478561-26488560 Setaria viridis
Sevir.6G149900 10.0kb downstream 10.0kb downstream 14534 true Chr_06: 26464027-26478560 Setaria viridis
Sevir.6G149900 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 26464027-26474026 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175562 5267 Panicoideae View MSA
124582983 5269 Grass View MSA
122042244 5273 Angiosperm View MSA
121347616 5274 Embryophyte View MSA
123428400 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain