Gene : Sevir.6G179600 S. viridis v2.1
Defline:  (1 of 1) PTHR22893//PTHR22893:SF67 - NADH OXIDOREDUCTASE-RELATED // 12-OXOPHYTODIENOATE REDUCTASE 3 Genomic Order:  2010
Name:  ? Sevir.6G179600 Secondary Identifier:  ? PAC:40620801
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-735 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G179600 0.5kb upstream 0.5kb upstream 5881 true Chr_06: 30010619-30016499 Setaria viridis
Sevir.6G179600 0.5kb upstream 0.5kb upstream 500 false Chr_06: 30010619-30011118 Setaria viridis
Sevir.6G179600 0.5kb downstream 0.5kb downstream 5881 true Chr_06: 30011119-30016999 Setaria viridis
Sevir.6G179600 0.5kb downstream 0.5kb downstream 500 false Chr_06: 30016500-30016999 Setaria viridis
Sevir.6G179600 1.0kb upstream 1.0kb upstream 6381 true Chr_06: 30010119-30016499 Setaria viridis
Sevir.6G179600 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 30010119-30011118 Setaria viridis
Sevir.6G179600 1.0kb downstream 1.0kb downstream 6381 true Chr_06: 30011119-30017499 Setaria viridis
Sevir.6G179600 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 30016500-30017499 Setaria viridis
Sevir.6G179600 2.0kb upstream 2.0kb upstream 7381 true Chr_06: 30009119-30016499 Setaria viridis
Sevir.6G179600 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 30009119-30011118 Setaria viridis
Sevir.6G179600 2.0kb downstream 2.0kb downstream 7381 true Chr_06: 30011119-30018499 Setaria viridis
Sevir.6G179600 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 30016500-30018499 Setaria viridis
Sevir.6G179600 5.0kb upstream 5.0kb upstream 10381 true Chr_06: 30006119-30016499 Setaria viridis
Sevir.6G179600 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 30006119-30011118 Setaria viridis
Sevir.6G179600 5.0kb downstream 5.0kb downstream 10381 true Chr_06: 30011119-30021499 Setaria viridis
Sevir.6G179600 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 30016500-30021499 Setaria viridis
Sevir.6G179600 10.0kb upstream 10.0kb upstream 15381 true Chr_06: 30001119-30016499 Setaria viridis
Sevir.6G179600 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 30001119-30011118 Setaria viridis
Sevir.6G179600 10.0kb downstream 10.0kb downstream 15381 true Chr_06: 30011119-30026499 Setaria viridis
Sevir.6G179600 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 30016500-30026499 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192557 5267 Panicoideae View MSA
124576769 5269 Grass View MSA
122045758 5273 Angiosperm View MSA
121351640 5274 Embryophyte View MSA
123428487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain