Gene : Sevir.7G300100 S. viridis v2.1

Defline:  (1 of 3) KOG0978//KOG4593 - E3 ubiquitin ligase involved in syntaxin degradation // Mitotic checkpoint protein MAD1 Genomic Order:  3284
Name:  ? Sevir.7G300100 Secondary Identifier:  ? PAC:40640638

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.7G300100 0.5kb upstream 0.5kb upstream 7415 true Chr_07: 32831072-32838486 Setaria viridis
Sevir.7G300100 0.5kb upstream 0.5kb upstream 500 false Chr_07: 32831072-32831571 Setaria viridis
Sevir.7G300100 0.5kb downstream 0.5kb downstream 7415 true Chr_07: 32831572-32838986 Setaria viridis
Sevir.7G300100 0.5kb downstream 0.5kb downstream 500 false Chr_07: 32838487-32838986 Setaria viridis
Sevir.7G300100 1.0kb upstream 1.0kb upstream 7915 true Chr_07: 32830572-32838486 Setaria viridis
Sevir.7G300100 1.0kb upstream 1.0kb upstream 1000 false Chr_07: 32830572-32831571 Setaria viridis
Sevir.7G300100 1.0kb downstream 1.0kb downstream 7915 true Chr_07: 32831572-32839486 Setaria viridis
Sevir.7G300100 1.0kb downstream 1.0kb downstream 1000 false Chr_07: 32838487-32839486 Setaria viridis
Sevir.7G300100 2.0kb upstream 2.0kb upstream 8915 true Chr_07: 32829572-32838486 Setaria viridis
Sevir.7G300100 2.0kb upstream 2.0kb upstream 2000 false Chr_07: 32829572-32831571 Setaria viridis
Sevir.7G300100 2.0kb downstream 2.0kb downstream 8915 true Chr_07: 32831572-32840486 Setaria viridis
Sevir.7G300100 2.0kb downstream 2.0kb downstream 2000 false Chr_07: 32838487-32840486 Setaria viridis
Sevir.7G300100 5.0kb upstream 5.0kb upstream 11915 true Chr_07: 32826572-32838486 Setaria viridis
Sevir.7G300100 5.0kb upstream 5.0kb upstream 5000 false Chr_07: 32826572-32831571 Setaria viridis
Sevir.7G300100 5.0kb downstream 5.0kb downstream 11915 true Chr_07: 32831572-32843486 Setaria viridis
Sevir.7G300100 5.0kb downstream 5.0kb downstream 5000 false Chr_07: 32838487-32843486 Setaria viridis
Sevir.7G300100 10.0kb upstream 10.0kb upstream 16915 true Chr_07: 32821572-32838486 Setaria viridis
Sevir.7G300100 10.0kb upstream 10.0kb upstream 10000 false Chr_07: 32821572-32831571 Setaria viridis
Sevir.7G300100 10.0kb downstream 10.0kb downstream 16915 true Chr_07: 32831572-32848486 Setaria viridis
Sevir.7G300100 10.0kb downstream 10.0kb downstream 10000 false Chr_07: 32838487-32848486 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185145 5267 Panicoideae View MSA
124568295 5269 Grass View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain