Gene : Sevir.6G258900 S. viridis v2.1
Defline:  (1 of 1) PTHR10168//PTHR10168:SF14 - GLUTAREDOXIN // GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED Genomic Order:  2887
Name:  ? Sevir.6G258900 Secondary Identifier:  ? PAC:40619979
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis THIOREDOX-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G258900 0.5kb upstream 0.5kb upstream 2655 true Chr_06: 36187761-36190415 Setaria viridis
Sevir.6G258900 0.5kb upstream 0.5kb upstream 500 false Chr_06: 36187761-36188260 Setaria viridis
Sevir.6G258900 0.5kb downstream 0.5kb downstream 2655 true Chr_06: 36188261-36190915 Setaria viridis
Sevir.6G258900 0.5kb downstream 0.5kb downstream 500 false Chr_06: 36190416-36190915 Setaria viridis
Sevir.6G258900 1.0kb upstream 1.0kb upstream 3155 true Chr_06: 36187261-36190415 Setaria viridis
Sevir.6G258900 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 36187261-36188260 Setaria viridis
Sevir.6G258900 1.0kb downstream 1.0kb downstream 3155 true Chr_06: 36188261-36191415 Setaria viridis
Sevir.6G258900 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 36190416-36191415 Setaria viridis
Sevir.6G258900 2.0kb upstream 2.0kb upstream 4155 true Chr_06: 36186261-36190415 Setaria viridis
Sevir.6G258900 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 36186261-36188260 Setaria viridis
Sevir.6G258900 2.0kb downstream 2.0kb downstream 4155 true Chr_06: 36188261-36192415 Setaria viridis
Sevir.6G258900 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 36190416-36192415 Setaria viridis
Sevir.6G258900 5.0kb upstream 5.0kb upstream 7155 true Chr_06: 36183261-36190415 Setaria viridis
Sevir.6G258900 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 36183261-36188260 Setaria viridis
Sevir.6G258900 5.0kb downstream 5.0kb downstream 7155 true Chr_06: 36188261-36195415 Setaria viridis
Sevir.6G258900 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 36190416-36195415 Setaria viridis
Sevir.6G258900 10.0kb upstream 10.0kb upstream 12155 true Chr_06: 36178261-36190415 Setaria viridis
Sevir.6G258900 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 36178261-36188260 Setaria viridis
Sevir.6G258900 10.0kb downstream 10.0kb downstream 12155 true Chr_06: 36188261-36200415 Setaria viridis
Sevir.6G258900 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 36190416-36200415 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026565 5273 Angiosperm View MSA
122189726 5267 Panicoideae View MSA
124576757 5269 Grass View MSA
121350843 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain