Gene : Sevir.6G254800 S. viridis v2.1
Defline:  (1 of 1) 4.2.1.9 - Dihydroxy-acid dehydratase Genomic Order:  2842
Name:  ? Sevir.6G254800 Secondary Identifier:  ? PAC:40619078
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis BRANCHED-CHAIN-AA-SYN-PWY Setaria viridis pathologic  
Sviridis ILEUSYN-PWY Setaria viridis pathologic  
Sviridis PWY-3001 Setaria viridis pathologic  
Sviridis VALSYN-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G254800 0.5kb upstream 0.5kb upstream 5397 true Chr_06: 35927530-35932926 Setaria viridis
Sevir.6G254800 0.5kb upstream 0.5kb upstream 500 false Chr_06: 35927530-35928029 Setaria viridis
Sevir.6G254800 0.5kb downstream 0.5kb downstream 5397 true Chr_06: 35928030-35933426 Setaria viridis
Sevir.6G254800 0.5kb downstream 0.5kb downstream 500 false Chr_06: 35932927-35933426 Setaria viridis
Sevir.6G254800 1.0kb upstream 1.0kb upstream 5897 true Chr_06: 35927030-35932926 Setaria viridis
Sevir.6G254800 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 35927030-35928029 Setaria viridis
Sevir.6G254800 1.0kb downstream 1.0kb downstream 5897 true Chr_06: 35928030-35933926 Setaria viridis
Sevir.6G254800 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 35932927-35933926 Setaria viridis
Sevir.6G254800 2.0kb upstream 2.0kb upstream 6897 true Chr_06: 35926030-35932926 Setaria viridis
Sevir.6G254800 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 35926030-35928029 Setaria viridis
Sevir.6G254800 2.0kb downstream 2.0kb downstream 6897 true Chr_06: 35928030-35934926 Setaria viridis
Sevir.6G254800 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 35932927-35934926 Setaria viridis
Sevir.6G254800 5.0kb upstream 5.0kb upstream 9897 true Chr_06: 35923030-35932926 Setaria viridis
Sevir.6G254800 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 35923030-35928029 Setaria viridis
Sevir.6G254800 5.0kb downstream 5.0kb downstream 9897 true Chr_06: 35928030-35937926 Setaria viridis
Sevir.6G254800 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 35932927-35937926 Setaria viridis
Sevir.6G254800 10.0kb upstream 10.0kb upstream 14897 true Chr_06: 35918030-35932926 Setaria viridis
Sevir.6G254800 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 35918030-35928029 Setaria viridis
Sevir.6G254800 10.0kb downstream 10.0kb downstream 14897 true Chr_06: 35928030-35942926 Setaria viridis
Sevir.6G254800 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 35932927-35942926 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181183 5267 Panicoideae View MSA
124569802 5269 Grass View MSA
122041651 5273 Angiosperm View MSA
121345047 5274 Embryophyte View MSA
123424997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain