Gene : Sevir.7G051100 S. viridis v2.1
Defline:  (1 of 1) PTHR11586:SF18 - NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN Genomic Order:  548
Name:  ? Sevir.7G051100 Secondary Identifier:  ? PAC:40642128
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis TRNA-CHARGING-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.7G051100 0.5kb upstream 0.5kb upstream 2797 true Chr_07: 13052421-13055217 Setaria viridis
Sevir.7G051100 0.5kb upstream 0.5kb upstream 500 false Chr_07: 13052421-13052920 Setaria viridis
Sevir.7G051100 0.5kb downstream 0.5kb downstream 2797 true Chr_07: 13052921-13055717 Setaria viridis
Sevir.7G051100 0.5kb downstream 0.5kb downstream 500 false Chr_07: 13055218-13055717 Setaria viridis
Sevir.7G051100 1.0kb upstream 1.0kb upstream 3297 true Chr_07: 13051921-13055217 Setaria viridis
Sevir.7G051100 1.0kb upstream 1.0kb upstream 1000 false Chr_07: 13051921-13052920 Setaria viridis
Sevir.7G051100 1.0kb downstream 1.0kb downstream 3297 true Chr_07: 13052921-13056217 Setaria viridis
Sevir.7G051100 1.0kb downstream 1.0kb downstream 1000 false Chr_07: 13055218-13056217 Setaria viridis
Sevir.7G051100 2.0kb upstream 2.0kb upstream 4297 true Chr_07: 13050921-13055217 Setaria viridis
Sevir.7G051100 2.0kb upstream 2.0kb upstream 2000 false Chr_07: 13050921-13052920 Setaria viridis
Sevir.7G051100 2.0kb downstream 2.0kb downstream 4297 true Chr_07: 13052921-13057217 Setaria viridis
Sevir.7G051100 2.0kb downstream 2.0kb downstream 2000 false Chr_07: 13055218-13057217 Setaria viridis
Sevir.7G051100 5.0kb upstream 5.0kb upstream 7297 true Chr_07: 13047921-13055217 Setaria viridis
Sevir.7G051100 5.0kb upstream 5.0kb upstream 5000 false Chr_07: 13047921-13052920 Setaria viridis
Sevir.7G051100 5.0kb downstream 5.0kb downstream 7297 true Chr_07: 13052921-13060217 Setaria viridis
Sevir.7G051100 5.0kb downstream 5.0kb downstream 5000 false Chr_07: 13055218-13060217 Setaria viridis
Sevir.7G051100 10.0kb upstream 10.0kb upstream 12297 true Chr_07: 13042921-13055217 Setaria viridis
Sevir.7G051100 10.0kb upstream 10.0kb upstream 10000 false Chr_07: 13042921-13052920 Setaria viridis
Sevir.7G051100 10.0kb downstream 10.0kb downstream 12297 true Chr_07: 13052921-13065217 Setaria viridis
Sevir.7G051100 10.0kb downstream 10.0kb downstream 10000 false Chr_07: 13055218-13065217 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178382 5267 Panicoideae View MSA
124568725 5269 Grass View MSA
122045155 5273 Angiosperm View MSA
121346605 5274 Embryophyte View MSA
123427531 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain