Gene : gene20236-v2.0.a2-hybrid F. vesca v2.0.a2
Defline:  (1 of 2) K01649 - 2-isopropylmalate synthase (leuA) Genomic Order:  3257
Name:  ? gene20236-v2.0.a2-hybrid Secondary Identifier:  ? PAC:40693090
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca BRANCHED-CHAIN-AA-SYN-PWY Fragaria vesca pathologic  
Fvesca LEUSYN-PWY Fragaria vesca pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene20236-v2.0.a2-hybrid 0.5kb upstream 0.5kb upstream 6506 true Fvb1: 18480187-18486692 Fragaria vesca
gene20236-v2.0.a2-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb1: 18480187-18480686 Fragaria vesca
gene20236-v2.0.a2-hybrid 0.5kb downstream 0.5kb downstream 6506 true Fvb1: 18480687-18487192 Fragaria vesca
gene20236-v2.0.a2-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb1: 18486693-18487192 Fragaria vesca
gene20236-v2.0.a2-hybrid 1.0kb upstream 1.0kb upstream 7006 true Fvb1: 18479687-18486692 Fragaria vesca
gene20236-v2.0.a2-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb1: 18479687-18480686 Fragaria vesca
gene20236-v2.0.a2-hybrid 1.0kb downstream 1.0kb downstream 7006 true Fvb1: 18480687-18487692 Fragaria vesca
gene20236-v2.0.a2-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb1: 18486693-18487692 Fragaria vesca
gene20236-v2.0.a2-hybrid 2.0kb upstream 2.0kb upstream 8006 true Fvb1: 18478687-18486692 Fragaria vesca
gene20236-v2.0.a2-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb1: 18478687-18480686 Fragaria vesca
gene20236-v2.0.a2-hybrid 2.0kb downstream 2.0kb downstream 8006 true Fvb1: 18480687-18488692 Fragaria vesca
gene20236-v2.0.a2-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb1: 18486693-18488692 Fragaria vesca
gene20236-v2.0.a2-hybrid 5.0kb upstream 5.0kb upstream 11006 true Fvb1: 18475687-18486692 Fragaria vesca
gene20236-v2.0.a2-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb1: 18475687-18480686 Fragaria vesca
gene20236-v2.0.a2-hybrid 5.0kb downstream 5.0kb downstream 11006 true Fvb1: 18480687-18491692 Fragaria vesca
gene20236-v2.0.a2-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb1: 18486693-18491692 Fragaria vesca
gene20236-v2.0.a2-hybrid 10.0kb upstream 10.0kb upstream 16006 true Fvb1: 18470687-18486692 Fragaria vesca
gene20236-v2.0.a2-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb1: 18470687-18480686 Fragaria vesca
gene20236-v2.0.a2-hybrid 10.0kb downstream 10.0kb downstream 16006 true Fvb1: 18480687-18496692 Fragaria vesca
gene20236-v2.0.a2-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb1: 18486693-18496692 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305643 5265 Fabidae View MSA
124073887 5270 Rosid View MSA
123749835 5271 Pentapetalae View MSA
122795041 5272 Eudicot View MSA
122042075 5273 Angiosperm View MSA
121343846 5274 Embryophyte View MSA
123424493 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain