Gene : gene12526-v1.0-hybrid F. vesca v2.0.a2
Defline:  (1 of 1) K08963 - methylthioribose-1-phosphate isomerase (mtnA) Genomic Order:  1020
Name:  ? gene12526-v1.0-hybrid Secondary Identifier:  ? PAC:40689090
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca PWY-4361 Fragaria vesca pathologic  
Fvesca PWY-7270 Fragaria vesca pathologic  
Fvesca PWY-7528 Fragaria vesca pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene12526-v1.0-hybrid 0.5kb upstream 0.5kb upstream 3280 true Fvb1: 4674369-4677648 Fragaria vesca
gene12526-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb1: 4677149-4677648 Fragaria vesca
gene12526-v1.0-hybrid 0.5kb downstream 0.5kb downstream 3280 true Fvb1: 4673869-4677148 Fragaria vesca
gene12526-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb1: 4673869-4674368 Fragaria vesca
gene12526-v1.0-hybrid 1.0kb upstream 1.0kb upstream 3780 true Fvb1: 4674369-4678148 Fragaria vesca
gene12526-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb1: 4677149-4678148 Fragaria vesca
gene12526-v1.0-hybrid 1.0kb downstream 1.0kb downstream 3780 true Fvb1: 4673369-4677148 Fragaria vesca
gene12526-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb1: 4673369-4674368 Fragaria vesca
gene12526-v1.0-hybrid 2.0kb upstream 2.0kb upstream 4780 true Fvb1: 4674369-4679148 Fragaria vesca
gene12526-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb1: 4677149-4679148 Fragaria vesca
gene12526-v1.0-hybrid 2.0kb downstream 2.0kb downstream 4780 true Fvb1: 4672369-4677148 Fragaria vesca
gene12526-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb1: 4672369-4674368 Fragaria vesca
gene12526-v1.0-hybrid 5.0kb upstream 5.0kb upstream 7780 true Fvb1: 4674369-4682148 Fragaria vesca
gene12526-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb1: 4677149-4682148 Fragaria vesca
gene12526-v1.0-hybrid 5.0kb downstream 5.0kb downstream 7780 true Fvb1: 4669369-4677148 Fragaria vesca
gene12526-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb1: 4669369-4674368 Fragaria vesca
gene12526-v1.0-hybrid 10.0kb upstream 10.0kb upstream 12780 true Fvb1: 4674369-4687148 Fragaria vesca
gene12526-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb1: 4677149-4687148 Fragaria vesca
gene12526-v1.0-hybrid 10.0kb downstream 10.0kb downstream 12780 true Fvb1: 4664369-4677148 Fragaria vesca
gene12526-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb1: 4664369-4674368 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303152 5265 Fabidae View MSA
124060423 5270 Rosid View MSA
123740094 5271 Pentapetalae View MSA
122788864 5272 Eudicot View MSA
122043863 5273 Angiosperm View MSA
121310201 5274 Embryophyte View MSA
123428305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain