Gene : gene12478-v1.0-hybrid F. vesca v2.0.a2
Defline:  (1 of 9) K05894 - 12-oxophytodienoic acid reductase (OPR) Genomic Order:  971
Name:  ? gene12478-v1.0-hybrid Secondary Identifier:  ? PAC:40692246
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca PWY-735 Fragaria vesca pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene12478-v1.0-hybrid 0.5kb upstream 0.5kb upstream 2663 true Fvb1: 4433675-4436337 Fragaria vesca
gene12478-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb1: 4433675-4434174 Fragaria vesca
gene12478-v1.0-hybrid 0.5kb downstream 0.5kb downstream 2663 true Fvb1: 4434175-4436837 Fragaria vesca
gene12478-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb1: 4436338-4436837 Fragaria vesca
gene12478-v1.0-hybrid 1.0kb upstream 1.0kb upstream 3163 true Fvb1: 4433175-4436337 Fragaria vesca
gene12478-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb1: 4433175-4434174 Fragaria vesca
gene12478-v1.0-hybrid 1.0kb downstream 1.0kb downstream 3163 true Fvb1: 4434175-4437337 Fragaria vesca
gene12478-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb1: 4436338-4437337 Fragaria vesca
gene12478-v1.0-hybrid 2.0kb upstream 2.0kb upstream 4163 true Fvb1: 4432175-4436337 Fragaria vesca
gene12478-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb1: 4432175-4434174 Fragaria vesca
gene12478-v1.0-hybrid 2.0kb downstream 2.0kb downstream 4163 true Fvb1: 4434175-4438337 Fragaria vesca
gene12478-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb1: 4436338-4438337 Fragaria vesca
gene12478-v1.0-hybrid 5.0kb upstream 5.0kb upstream 7163 true Fvb1: 4429175-4436337 Fragaria vesca
gene12478-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb1: 4429175-4434174 Fragaria vesca
gene12478-v1.0-hybrid 5.0kb downstream 5.0kb downstream 7163 true Fvb1: 4434175-4441337 Fragaria vesca
gene12478-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb1: 4436338-4441337 Fragaria vesca
gene12478-v1.0-hybrid 10.0kb upstream 10.0kb upstream 12163 true Fvb1: 4424175-4436337 Fragaria vesca
gene12478-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb1: 4424175-4434174 Fragaria vesca
gene12478-v1.0-hybrid 10.0kb downstream 10.0kb downstream 12163 true Fvb1: 4434175-4446337 Fragaria vesca
gene12478-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb1: 4436338-4446337 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122229530 5265 Fabidae View MSA
123977093 5270 Rosid View MSA
123752843 5271 Pentapetalae View MSA
122793200 5272 Eudicot View MSA
122045758 5273 Angiosperm View MSA
121351640 5274 Embryophyte View MSA
123428487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain