Gene : gene12683-v1.0-hybrid F. vesca v2.0.a2
Defline:  (1 of 1) 5.5.1.18 - Lycopene epsilon-cyclase Genomic Order:  904
Name:  ? gene12683-v1.0-hybrid Secondary Identifier:  ? PAC:40692763
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca CAROTENOID-PWY Fragaria vesca pathologic  
Fvesca PWY-5175 Fragaria vesca pathologic  
Fvesca PWY-5946 Fragaria vesca pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene12683-v1.0-hybrid 0.5kb upstream 0.5kb upstream 4107 true Fvb1: 4137461-4141567 Fragaria vesca
gene12683-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb1: 4137461-4137960 Fragaria vesca
gene12683-v1.0-hybrid 0.5kb downstream 0.5kb downstream 4107 true Fvb1: 4137961-4142067 Fragaria vesca
gene12683-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb1: 4141568-4142067 Fragaria vesca
gene12683-v1.0-hybrid 1.0kb upstream 1.0kb upstream 4607 true Fvb1: 4136961-4141567 Fragaria vesca
gene12683-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb1: 4136961-4137960 Fragaria vesca
gene12683-v1.0-hybrid 1.0kb downstream 1.0kb downstream 4607 true Fvb1: 4137961-4142567 Fragaria vesca
gene12683-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb1: 4141568-4142567 Fragaria vesca
gene12683-v1.0-hybrid 2.0kb upstream 2.0kb upstream 5607 true Fvb1: 4135961-4141567 Fragaria vesca
gene12683-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb1: 4135961-4137960 Fragaria vesca
gene12683-v1.0-hybrid 2.0kb downstream 2.0kb downstream 5607 true Fvb1: 4137961-4143567 Fragaria vesca
gene12683-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb1: 4141568-4143567 Fragaria vesca
gene12683-v1.0-hybrid 5.0kb upstream 5.0kb upstream 8607 true Fvb1: 4132961-4141567 Fragaria vesca
gene12683-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb1: 4132961-4137960 Fragaria vesca
gene12683-v1.0-hybrid 5.0kb downstream 5.0kb downstream 8607 true Fvb1: 4137961-4146567 Fragaria vesca
gene12683-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb1: 4141568-4146567 Fragaria vesca
gene12683-v1.0-hybrid 10.0kb upstream 10.0kb upstream 13607 true Fvb1: 4127961-4141567 Fragaria vesca
gene12683-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb1: 4127961-4137960 Fragaria vesca
gene12683-v1.0-hybrid 10.0kb downstream 10.0kb downstream 13607 true Fvb1: 4137961-4151567 Fragaria vesca
gene12683-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb1: 4141568-4151567 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305319 5265 Fabidae View MSA
124068333 5270 Rosid View MSA
123739919 5271 Pentapetalae View MSA
122791667 5272 Eudicot View MSA
122041543 5273 Angiosperm View MSA
121345455 5274 Embryophyte View MSA
123424108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain