Gene : gene29522-v1.0-hybrid F. vesca v2.0.a2
Defline:  (1 of 2) K13789 - geranylgeranyl diphosphate synthase, type II (GGPS) Genomic Order:  1652
Name:  ? gene29522-v1.0-hybrid Secondary Identifier:  ? PAC:40691460
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca PWY-5120 Fragaria vesca pathologic  
Fvesca PWY-5910 Fragaria vesca pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene29522-v1.0-hybrid 0.5kb upstream 0.5kb upstream 3149 true Fvb1: 7833241-7836389 Fragaria vesca
gene29522-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb1: 7833241-7833740 Fragaria vesca
gene29522-v1.0-hybrid 0.5kb downstream 0.5kb downstream 3149 true Fvb1: 7833741-7836889 Fragaria vesca
gene29522-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb1: 7836390-7836889 Fragaria vesca
gene29522-v1.0-hybrid 1.0kb upstream 1.0kb upstream 3649 true Fvb1: 7832741-7836389 Fragaria vesca
gene29522-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb1: 7832741-7833740 Fragaria vesca
gene29522-v1.0-hybrid 1.0kb downstream 1.0kb downstream 3649 true Fvb1: 7833741-7837389 Fragaria vesca
gene29522-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb1: 7836390-7837389 Fragaria vesca
gene29522-v1.0-hybrid 2.0kb upstream 2.0kb upstream 4649 true Fvb1: 7831741-7836389 Fragaria vesca
gene29522-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb1: 7831741-7833740 Fragaria vesca
gene29522-v1.0-hybrid 2.0kb downstream 2.0kb downstream 4649 true Fvb1: 7833741-7838389 Fragaria vesca
gene29522-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb1: 7836390-7838389 Fragaria vesca
gene29522-v1.0-hybrid 5.0kb upstream 5.0kb upstream 7649 true Fvb1: 7828741-7836389 Fragaria vesca
gene29522-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb1: 7828741-7833740 Fragaria vesca
gene29522-v1.0-hybrid 5.0kb downstream 5.0kb downstream 7649 true Fvb1: 7833741-7841389 Fragaria vesca
gene29522-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb1: 7836390-7841389 Fragaria vesca
gene29522-v1.0-hybrid 10.0kb upstream 10.0kb upstream 12649 true Fvb1: 7823741-7836389 Fragaria vesca
gene29522-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb1: 7823741-7833740 Fragaria vesca
gene29522-v1.0-hybrid 10.0kb downstream 10.0kb downstream 12649 true Fvb1: 7833741-7846389 Fragaria vesca
gene29522-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb1: 7836390-7846389 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300633 5265 Fabidae View MSA
124062615 5270 Rosid View MSA
123750127 5271 Pentapetalae View MSA
122794006 5272 Eudicot View MSA
122045672 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain