Gene : gene35238-v2.0.a2-hybrid F. vesca v2.0.a2
Defline:  (1 of 3) K01184 - polygalacturonase (E3.2.1.15) Genomic Order:  28
Name:  ? gene35238-v2.0.a2-hybrid Secondary Identifier:  ? PAC:40692357
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca PWY-1081 Fragaria vesca pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene35238-v2.0.a2-hybrid 0.5kb upstream 0.5kb upstream 3313 true Fvb1: 140363-143675 Fragaria vesca
gene35238-v2.0.a2-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb1: 140363-140862 Fragaria vesca
gene35238-v2.0.a2-hybrid 0.5kb downstream 0.5kb downstream 3313 true Fvb1: 140863-144175 Fragaria vesca
gene35238-v2.0.a2-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb1: 143676-144175 Fragaria vesca
gene35238-v2.0.a2-hybrid 1.0kb upstream 1.0kb upstream 3813 true Fvb1: 139863-143675 Fragaria vesca
gene35238-v2.0.a2-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb1: 139863-140862 Fragaria vesca
gene35238-v2.0.a2-hybrid 1.0kb downstream 1.0kb downstream 3813 true Fvb1: 140863-144675 Fragaria vesca
gene35238-v2.0.a2-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb1: 143676-144675 Fragaria vesca
gene35238-v2.0.a2-hybrid 2.0kb upstream 2.0kb upstream 4813 true Fvb1: 138863-143675 Fragaria vesca
gene35238-v2.0.a2-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb1: 138863-140862 Fragaria vesca
gene35238-v2.0.a2-hybrid 2.0kb downstream 2.0kb downstream 4813 true Fvb1: 140863-145675 Fragaria vesca
gene35238-v2.0.a2-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb1: 143676-145675 Fragaria vesca
gene35238-v2.0.a2-hybrid 5.0kb upstream 5.0kb upstream 7813 true Fvb1: 135863-143675 Fragaria vesca
gene35238-v2.0.a2-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb1: 135863-140862 Fragaria vesca
gene35238-v2.0.a2-hybrid 5.0kb downstream 5.0kb downstream 7813 true Fvb1: 140863-148675 Fragaria vesca
gene35238-v2.0.a2-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb1: 143676-148675 Fragaria vesca
gene35238-v2.0.a2-hybrid 10.0kb upstream 10.0kb upstream 12813 true Fvb1: 130863-143675 Fragaria vesca
gene35238-v2.0.a2-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb1: 130863-140862 Fragaria vesca
gene35238-v2.0.a2-hybrid 10.0kb downstream 10.0kb downstream 12813 true Fvb1: 140863-153675 Fragaria vesca
gene35238-v2.0.a2-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb1: 143676-153675 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314468 5265 Fabidae View MSA
124060937 5270 Rosid View MSA
123747300 5271 Pentapetalae View MSA
122794998 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain