Gene : gene09128-v1.0-hybrid F. vesca v2.0.a2

Defline:  (1 of 17) 2.3.1.133 - Shikimate O-hydroxycinnamoyltransferase Genomic Order:  4031
Name:  ? gene09128-v1.0-hybrid Secondary Identifier:  ? PAC:40668128

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca PWY-361 Fragaria vesca pathologic  
Fvesca PWY-6040 Fragaria vesca pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene09128-v1.0-hybrid 0.5kb upstream 0.5kb upstream 1874 true Fvb2: 25032782-25034655 Fragaria vesca
gene09128-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb2: 25032782-25033281 Fragaria vesca
gene09128-v1.0-hybrid 0.5kb downstream 0.5kb downstream 1874 true Fvb2: 25033282-25035155 Fragaria vesca
gene09128-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb2: 25034656-25035155 Fragaria vesca
gene09128-v1.0-hybrid 1.0kb upstream 1.0kb upstream 2374 true Fvb2: 25032282-25034655 Fragaria vesca
gene09128-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb2: 25032282-25033281 Fragaria vesca
gene09128-v1.0-hybrid 1.0kb downstream 1.0kb downstream 2374 true Fvb2: 25033282-25035655 Fragaria vesca
gene09128-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb2: 25034656-25035655 Fragaria vesca
gene09128-v1.0-hybrid 2.0kb upstream 2.0kb upstream 3374 true Fvb2: 25031282-25034655 Fragaria vesca
gene09128-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb2: 25031282-25033281 Fragaria vesca
gene09128-v1.0-hybrid 2.0kb downstream 2.0kb downstream 3374 true Fvb2: 25033282-25036655 Fragaria vesca
gene09128-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb2: 25034656-25036655 Fragaria vesca
gene09128-v1.0-hybrid 5.0kb upstream 5.0kb upstream 6374 true Fvb2: 25028282-25034655 Fragaria vesca
gene09128-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb2: 25028282-25033281 Fragaria vesca
gene09128-v1.0-hybrid 5.0kb downstream 5.0kb downstream 6374 true Fvb2: 25033282-25039655 Fragaria vesca
gene09128-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb2: 25034656-25039655 Fragaria vesca
gene09128-v1.0-hybrid 10.0kb upstream 10.0kb upstream 11374 true Fvb2: 25023282-25034655 Fragaria vesca
gene09128-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb2: 25023282-25033281 Fragaria vesca
gene09128-v1.0-hybrid 10.0kb downstream 10.0kb downstream 11374 true Fvb2: 25033282-25044655 Fragaria vesca
gene09128-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb2: 25034656-25044655 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300600 5265 Fabidae View MSA
124068484 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain