Gene : gene20645-v2.0.a2-hybrid F. vesca v2.0.a2
Defline:  (1 of 10) K00454 - lipoxygenase (LOX2S) Genomic Order:  4678
Name:  ? gene20645-v2.0.a2-hybrid Secondary Identifier:  ? PAC:40696832
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca PWY-5409 Fragaria vesca pathologic  
Fvesca PWY-5410 Fragaria vesca pathologic  
Fvesca PWY-735 Fragaria vesca pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene20645-v2.0.a2-hybrid 0.5kb upstream 0.5kb upstream 5346 true Fvb3: 30479272-30484617 Fragaria vesca
gene20645-v2.0.a2-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb3: 30484118-30484617 Fragaria vesca
gene20645-v2.0.a2-hybrid 0.5kb downstream 0.5kb downstream 5346 true Fvb3: 30478772-30484117 Fragaria vesca
gene20645-v2.0.a2-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb3: 30478772-30479271 Fragaria vesca
gene20645-v2.0.a2-hybrid 1.0kb upstream 1.0kb upstream 5846 true Fvb3: 30479272-30485117 Fragaria vesca
gene20645-v2.0.a2-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb3: 30484118-30485117 Fragaria vesca
gene20645-v2.0.a2-hybrid 1.0kb downstream 1.0kb downstream 5846 true Fvb3: 30478272-30484117 Fragaria vesca
gene20645-v2.0.a2-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb3: 30478272-30479271 Fragaria vesca
gene20645-v2.0.a2-hybrid 2.0kb upstream 2.0kb upstream 6846 true Fvb3: 30479272-30486117 Fragaria vesca
gene20645-v2.0.a2-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb3: 30484118-30486117 Fragaria vesca
gene20645-v2.0.a2-hybrid 2.0kb downstream 2.0kb downstream 6846 true Fvb3: 30477272-30484117 Fragaria vesca
gene20645-v2.0.a2-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb3: 30477272-30479271 Fragaria vesca
gene20645-v2.0.a2-hybrid 5.0kb upstream 5.0kb upstream 9846 true Fvb3: 30479272-30489117 Fragaria vesca
gene20645-v2.0.a2-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb3: 30484118-30489117 Fragaria vesca
gene20645-v2.0.a2-hybrid 5.0kb downstream 5.0kb downstream 9846 true Fvb3: 30474272-30484117 Fragaria vesca
gene20645-v2.0.a2-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb3: 30474272-30479271 Fragaria vesca
gene20645-v2.0.a2-hybrid 10.0kb upstream 10.0kb upstream 14846 true Fvb3: 30479272-30494117 Fragaria vesca
gene20645-v2.0.a2-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb3: 30484118-30494117 Fragaria vesca
gene20645-v2.0.a2-hybrid 10.0kb downstream 10.0kb downstream 14846 true Fvb3: 30469272-30484117 Fragaria vesca
gene20645-v2.0.a2-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb3: 30469272-30479271 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309355 5265 Fabidae View MSA
124069762 5270 Rosid View MSA
123743667 5271 Pentapetalae View MSA
122789767 5272 Eudicot View MSA
122043119 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain