Gene : gene36485-v2.0.a2-hybrid F. vesca v2.0.a2
Defline:  (1 of 5) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  4611
Name:  ? gene36485-v2.0.a2-hybrid Secondary Identifier:  ? PAC:40695085
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene36485-v2.0.a2-hybrid 0.5kb upstream 0.5kb upstream 3733 true Fvb3: 30096026-30099758 Fragaria vesca
gene36485-v2.0.a2-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb3: 30099259-30099758 Fragaria vesca
gene36485-v2.0.a2-hybrid 0.5kb downstream 0.5kb downstream 3733 true Fvb3: 30095526-30099258 Fragaria vesca
gene36485-v2.0.a2-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb3: 30095526-30096025 Fragaria vesca
gene36485-v2.0.a2-hybrid 1.0kb upstream 1.0kb upstream 4233 true Fvb3: 30096026-30100258 Fragaria vesca
gene36485-v2.0.a2-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb3: 30099259-30100258 Fragaria vesca
gene36485-v2.0.a2-hybrid 1.0kb downstream 1.0kb downstream 4233 true Fvb3: 30095026-30099258 Fragaria vesca
gene36485-v2.0.a2-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb3: 30095026-30096025 Fragaria vesca
gene36485-v2.0.a2-hybrid 2.0kb upstream 2.0kb upstream 5233 true Fvb3: 30096026-30101258 Fragaria vesca
gene36485-v2.0.a2-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb3: 30099259-30101258 Fragaria vesca
gene36485-v2.0.a2-hybrid 2.0kb downstream 2.0kb downstream 5233 true Fvb3: 30094026-30099258 Fragaria vesca
gene36485-v2.0.a2-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb3: 30094026-30096025 Fragaria vesca
gene36485-v2.0.a2-hybrid 5.0kb upstream 5.0kb upstream 8233 true Fvb3: 30096026-30104258 Fragaria vesca
gene36485-v2.0.a2-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb3: 30099259-30104258 Fragaria vesca
gene36485-v2.0.a2-hybrid 5.0kb downstream 5.0kb downstream 8233 true Fvb3: 30091026-30099258 Fragaria vesca
gene36485-v2.0.a2-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb3: 30091026-30096025 Fragaria vesca
gene36485-v2.0.a2-hybrid 10.0kb upstream 10.0kb upstream 13233 true Fvb3: 30096026-30109258 Fragaria vesca
gene36485-v2.0.a2-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb3: 30099259-30109258 Fragaria vesca
gene36485-v2.0.a2-hybrid 10.0kb downstream 10.0kb downstream 13233 true Fvb3: 30086026-30099258 Fragaria vesca
gene36485-v2.0.a2-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb3: 30086026-30096025 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312019 5265 Fabidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain