Gene : gene27894-v2.0.a2-hybrid F. vesca v2.0.a2
Defline:  (1 of 2) K01703 - 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit (leuC) Genomic Order:  1311
Name:  ? gene27894-v2.0.a2-hybrid Secondary Identifier:  ? PAC:40686862
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca BRANCHED-CHAIN-AA-SYN-PWY Fragaria vesca pathologic  
Fvesca LEUSYN-PWY Fragaria vesca pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene27894-v2.0.a2-hybrid 0.5kb upstream 0.5kb upstream 5596 true Fvb4: 10486287-10491882 Fragaria vesca
gene27894-v2.0.a2-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb4: 10491383-10491882 Fragaria vesca
gene27894-v2.0.a2-hybrid 0.5kb downstream 0.5kb downstream 5596 true Fvb4: 10485787-10491382 Fragaria vesca
gene27894-v2.0.a2-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb4: 10485787-10486286 Fragaria vesca
gene27894-v2.0.a2-hybrid 1.0kb upstream 1.0kb upstream 6096 true Fvb4: 10486287-10492382 Fragaria vesca
gene27894-v2.0.a2-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb4: 10491383-10492382 Fragaria vesca
gene27894-v2.0.a2-hybrid 1.0kb downstream 1.0kb downstream 6096 true Fvb4: 10485287-10491382 Fragaria vesca
gene27894-v2.0.a2-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb4: 10485287-10486286 Fragaria vesca
gene27894-v2.0.a2-hybrid 2.0kb upstream 2.0kb upstream 7096 true Fvb4: 10486287-10493382 Fragaria vesca
gene27894-v2.0.a2-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb4: 10491383-10493382 Fragaria vesca
gene27894-v2.0.a2-hybrid 2.0kb downstream 2.0kb downstream 7096 true Fvb4: 10484287-10491382 Fragaria vesca
gene27894-v2.0.a2-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb4: 10484287-10486286 Fragaria vesca
gene27894-v2.0.a2-hybrid 5.0kb upstream 5.0kb upstream 10096 true Fvb4: 10486287-10496382 Fragaria vesca
gene27894-v2.0.a2-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb4: 10491383-10496382 Fragaria vesca
gene27894-v2.0.a2-hybrid 5.0kb downstream 5.0kb downstream 10096 true Fvb4: 10481287-10491382 Fragaria vesca
gene27894-v2.0.a2-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb4: 10481287-10486286 Fragaria vesca
gene27894-v2.0.a2-hybrid 10.0kb upstream 10.0kb upstream 15096 true Fvb4: 10486287-10501382 Fragaria vesca
gene27894-v2.0.a2-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb4: 10491383-10501382 Fragaria vesca
gene27894-v2.0.a2-hybrid 10.0kb downstream 10.0kb downstream 15096 true Fvb4: 10476287-10491382 Fragaria vesca
gene27894-v2.0.a2-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb4: 10476287-10486286 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303896 5265 Fabidae View MSA
124064281 5270 Rosid View MSA
123737905 5271 Pentapetalae View MSA
122792861 5272 Eudicot View MSA
122047334 5273 Angiosperm View MSA
121347218 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain