Gene : gene08900-v1.0-hybrid F. vesca v2.0.a2
Defline:  (1 of 1) K01704 - 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit (leuD) Genomic Order:  2271
Name:  ? gene08900-v1.0-hybrid Secondary Identifier:  ? PAC:40671314
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca BRANCHED-CHAIN-AA-SYN-PWY Fragaria vesca pathologic  
Fvesca LEUSYN-PWY Fragaria vesca pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene08900-v1.0-hybrid 0.5kb upstream 0.5kb upstream 1591 true Fvb5: 11218459-11220049 Fragaria vesca
gene08900-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb5: 11218459-11218958 Fragaria vesca
gene08900-v1.0-hybrid 0.5kb downstream 0.5kb downstream 1591 true Fvb5: 11218959-11220549 Fragaria vesca
gene08900-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb5: 11220050-11220549 Fragaria vesca
gene08900-v1.0-hybrid 1.0kb upstream 1.0kb upstream 2091 true Fvb5: 11217959-11220049 Fragaria vesca
gene08900-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb5: 11217959-11218958 Fragaria vesca
gene08900-v1.0-hybrid 1.0kb downstream 1.0kb downstream 2091 true Fvb5: 11218959-11221049 Fragaria vesca
gene08900-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb5: 11220050-11221049 Fragaria vesca
gene08900-v1.0-hybrid 2.0kb upstream 2.0kb upstream 3091 true Fvb5: 11216959-11220049 Fragaria vesca
gene08900-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb5: 11216959-11218958 Fragaria vesca
gene08900-v1.0-hybrid 2.0kb downstream 2.0kb downstream 3091 true Fvb5: 11218959-11222049 Fragaria vesca
gene08900-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb5: 11220050-11222049 Fragaria vesca
gene08900-v1.0-hybrid 5.0kb upstream 5.0kb upstream 6091 true Fvb5: 11213959-11220049 Fragaria vesca
gene08900-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb5: 11213959-11218958 Fragaria vesca
gene08900-v1.0-hybrid 5.0kb downstream 5.0kb downstream 6091 true Fvb5: 11218959-11225049 Fragaria vesca
gene08900-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb5: 11220050-11225049 Fragaria vesca
gene08900-v1.0-hybrid 10.0kb upstream 10.0kb upstream 11091 true Fvb5: 11208959-11220049 Fragaria vesca
gene08900-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb5: 11208959-11218958 Fragaria vesca
gene08900-v1.0-hybrid 10.0kb downstream 10.0kb downstream 11091 true Fvb5: 11218959-11230049 Fragaria vesca
gene08900-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb5: 11220050-11230049 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040980 5273 Angiosperm View MSA
122307024 5265 Fabidae View MSA
124068442 5270 Rosid View MSA
123736502 5271 Pentapetalae View MSA
122789957 5272 Eudicot View MSA
121345878 5274 Embryophyte View MSA
123423763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain