Gene : gene21732-v1.0-hybrid F. vesca v2.0.a2
Defline:  (1 of 1) K14593 - capsanthin/capsorubin synthase (CCS1) Genomic Order:  56
Name:  ? gene21732-v1.0-hybrid Secondary Identifier:  ? PAC:40694470
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Fvesca PWY-6809 Fragaria vesca pathologic  
Fvesca PWY-695 Fragaria vesca pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene21732-v1.0-hybrid 0.5kb upstream 0.5kb upstream 6246 true FvbUn: 488063-494308 Fragaria vesca
gene21732-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false FvbUn: 493809-494308 Fragaria vesca
gene21732-v1.0-hybrid 0.5kb downstream 0.5kb downstream 6246 true FvbUn: 487563-493808 Fragaria vesca
gene21732-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false FvbUn: 487563-488062 Fragaria vesca
gene21732-v1.0-hybrid 1.0kb upstream 1.0kb upstream 6746 true FvbUn: 488063-494808 Fragaria vesca
gene21732-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false FvbUn: 493809-494808 Fragaria vesca
gene21732-v1.0-hybrid 1.0kb downstream 1.0kb downstream 6746 true FvbUn: 487063-493808 Fragaria vesca
gene21732-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false FvbUn: 487063-488062 Fragaria vesca
gene21732-v1.0-hybrid 2.0kb upstream 2.0kb upstream 7746 true FvbUn: 488063-495808 Fragaria vesca
gene21732-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false FvbUn: 493809-495808 Fragaria vesca
gene21732-v1.0-hybrid 2.0kb downstream 2.0kb downstream 7746 true FvbUn: 486063-493808 Fragaria vesca
gene21732-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false FvbUn: 486063-488062 Fragaria vesca
gene21732-v1.0-hybrid 5.0kb upstream 5.0kb upstream 10746 true FvbUn: 488063-498808 Fragaria vesca
gene21732-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false FvbUn: 493809-498808 Fragaria vesca
gene21732-v1.0-hybrid 5.0kb downstream 5.0kb downstream 10746 true FvbUn: 483063-493808 Fragaria vesca
gene21732-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false FvbUn: 483063-488062 Fragaria vesca
gene21732-v1.0-hybrid 10.0kb upstream 10.0kb upstream 15746 true FvbUn: 488063-503808 Fragaria vesca
gene21732-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false FvbUn: 493809-503808 Fragaria vesca
gene21732-v1.0-hybrid 10.0kb downstream 10.0kb downstream 15746 true FvbUn: 478063-493808 Fragaria vesca
gene21732-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false FvbUn: 478063-488062 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308924 5265 Fabidae View MSA
124070716 5270 Rosid View MSA
123749598 5271 Pentapetalae View MSA
122795342 5272 Eudicot View MSA
122048987 5273 Angiosperm View MSA
121311196 5274 Embryophyte View MSA
123348524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain