Protein Domain : IPR000914

Type:  Domain Name:  Solute-binding protein family 5 domain
Description:  Bacterial high affinity transport systems are involved in active transport of solutes across the cytoplasmic membrane. Most of the bacterial ABC (ATP-binding cassette) importers are composed of one or two transmembrane permease proteins, one or two nucleotide-binding proteins and a highly specific periplasmic solute-binding protein. In Gram-negative bacteria the solute-binding proteins are dissolved in the periplasm, while in archaea and Gram-positive bacteria, their solute-binding proteins are membrane-anchored lipoproteins [, ]. On the basis of sequence similarities, the vast majority of these solute-binding proteins can be grouped [] into eight families or clusters, which generally correlate with the nature of the solute bound. This entry represents a domain found in the solute-binding protein family 5. Family 5 members include:Periplasmic oligopeptide-binding proteins (oppA) of Gram-negative bacteria and homologous lipoproteins in Gram-positive bacteria (oppA, amiA or appA)Periplasmic dipeptide-binding proteins of Escherichia coli(dppA) and Bacillus subtilis(dppE)Periplasmic murein peptide-binding protein of E. coli (mppA) Periplasmic peptide-binding proteins sapA of E. coli, Salmonella typhimuriumand Haemophilus influenzaePeriplasmic nickel-binding protein (nikA) of E. coliHaem-binding lipoprotein (hbpA or dppA) from H. influenzaeLipoprotein xP55 from Streptomyces lividansHypothetical proteins from H. influenzae (HI0213) and Rhizobium sp.(strain NGR234) symbiotic plasmid (y4tO and y4wM)HTH-type transcriptional regulator SgrR from E. coli. The solute-binding domain is localised in its C-terminal []. Short Name:  SBP_5_dom
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0 Child Features

0 Contains

1 Cross References

Identifier
PF00496

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

16 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
34826.m000022 B9TDE7 PAC:16826368 Ricinus communis 233  
40994.m000014 B9TN84 PAC:16827363 Ricinus communis 255  
51948.m000014 PAC:16828467 Ricinus communis 286  
27478.m000092 B9T8J6 PAC:16798482 Ricinus communis 485  
Pp3s32_30V3.1.p PAC:32948416 Physcomitrium patens 2661  
Pp3s30_460V3.1.p PAC:32948553 Physcomitrium patens 3268  
Pp3s30_390V3.1.p PAC:32948536 Physcomitrium patens 2531  
Pp3s42_40V3.1.p PAC:32945173 Physcomitrium patens 4092  
Pp3s34_440V3.1.p PAC:32948278 Physcomitrium patens 541  
Pp3s32_170V3.1.p PAC:32948394 Physcomitrium patens 910  
Pp3s96_60V3.1.p PAC:32966540 Physcomitrium patens 4015  
Brdisv1BdTR11A1041101m.p PAC:35695888 Brachypodium distachyon BdTR11a 1123  
Cz01g27080.t1 PAC:38236145 Chromochloris zofingiensis 520  
Cz04g07190.t1 PAC:38235299 Chromochloris zofingiensis 378  
Cz04g07180.t1 PAC:38235217 Chromochloris zofingiensis 145  
Zosma07g01910 PAC:50101841 Zostera marina 1129  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8336670
            17209026
            18310026
            8003968