Protein Domain : IPR005118

Type:  Domain Name:  Transcription-repair-coupling factor, C-terminal domain
Description:  This domain is found in proteins necessary for strand-specific repair in DNA such as TRCF in Escherichia coli. A lesion in the template strand blocks the RNA polymerase complex (RNAP). The RNAP-DNA-RNA complex is specifically recognised by the transcription-repair-coupling factor (TRCF) which releases RNAP and the truncated transcript.The C-terminal region of TRCF have been shown to be necessary for RNAP displacement [, ]. Short Name:  TRCF_C
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0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF03461
SM00982

1 Found In

DB identifier Type Name
IPR004576 Family Transcription-repair coupling factor

1 GO Annotation

GO Term Gene Name
GO:0006281 IPR005118

1 Ontology Annotations

GO Term Gene Name
GO:0006281 IPR005118

0 Parent Features

506 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
30131.m006945 B9RGU4 PAC:16818770 Ricinus communis 857  
28942.m000032 B9TCC6 PAC:16802004 Ricinus communis 282  
orange1.1g003260m A0A067FJW1 PAC:18127500 Citrus sinensis 835  
orange1.1g003268m A0A067FJW1 PAC:18127501 Citrus sinensis 835  
orange1.1g003267m A0A067FJW1 PAC:18127499 Citrus sinensis 835  
orange1.1g006476m A0A067F7Y4 PAC:18127502 Citrus sinensis 643  
Ciclev10017439m V4UCZ2 PAC:20817086 Citrus clementina 835  
Potri.014G145000.6 PAC:27035427 Populus trichocarpa 232  
Potri.014G145000.5 PAC:27035426 Populus trichocarpa 299  
Potri.002G237400.1 PAC:27021468 Populus trichocarpa 792  
Araha.11756s0032.1.p PAC:28856510 Arabidopsis halleri 790  
Glyma.16G046000.1.p I1ML78 PAC:30561882 Glycine max 826  
Glyma.19G106000.1.p K7MXQ0 PAC:30511766 Glycine max 823  
Glyma.19G106000.2.p K7MXQ0 PAC:30511765 Glycine max 823  
SapurV1A.0542s0080.1.p PAC:31400104 Salix purpurea 817  
SapurV1A.0542s0080.2.p PAC:31400105 Salix purpurea 817  
SapurV1A.0071s0490.1.p PAC:31405934 Salix purpurea 819  
evm_27.model.AmTr_v1.0_scaffold00016.258 W1PGX0 PAC:31569582 Amborella trichopoda 887  
Traes_4AL_F93CFF9EF.1 PAC:31973061 Triticum aestivum 100  
Traes_4BS_639A25FE8.2 PAC:31994306 Triticum aestivum 352  
Traes_4BS_639A25FE8.7 PAC:31994312 Triticum aestivum 341  
Traes_4BS_639A25FE8.9 PAC:31994314 Triticum aestivum 327  
Traes_4BS_639A25FE8.1 PAC:31994311 Triticum aestivum 346  
Traes_4BS_639A25FE8.3 PAC:31994307 Triticum aestivum 352  
Traes_4BS_639A25FE8.4 PAC:31994308 Triticum aestivum 352  
Traes_4BS_639A25FE8.15 PAC:31994320 Triticum aestivum 296  
Traes_4BS_639A25FE8.8 PAC:31994313 Triticum aestivum 341  
Traes_4BS_639A25FE8.11 PAC:31994316 Triticum aestivum 315  
Traes_4BS_639A25FE8.6 PAC:31994310 Triticum aestivum 346  
Traes_4BS_639A25FE8.5 PAC:31994309 Triticum aestivum 346  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            7876261
            14602898