Protein Domain : IPR003139

Type:  Domain Name:  Delta-retroviral matrix protein
Description:  Retroviral matrix proteins (or major core proteins) are components of envelope-associated capsids, which line the inner surface of virus envelopes and are associated with viral membranes []. Matrix proteins are produced as part of Gag precursor polyproteins. During viral maturation, the Gag polyprotein is cleaved into major structural proteins by the viral protease, yielding the matrix (MA), capsid (CA), nucleocapsid (NC), and some smaller peptides. Gag-derived proteins govern the entire assembly and release of the virus particles, with matrix proteins playing key roles in Gag stability, capsid assembly, transport and budding. Although matrix proteins from different retroviruses appear to perform similar functions and can have similar structural folds, their primary sequences can be very different.This entry represents matrix proteins from delta-retroviruses such as Human T-lymphotropic virus 1and Human T-cell leukemia virus 2(HTLV-2), both members of the human oncovirus subclass of retroviruses [, ]. Short Name:  D_retro_matrix

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF02228
G3DSA:1.10.185.10

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0005198 IPR003139
GO:0019013 IPR003139

2 Ontology Annotations

GO Term Gene Name
GO:0005198 IPR003139
GO:0019013 IPR003139

1 Parent Features

DB identifier Type Name
IPR010999 Domain Retroviral matrix protein

72 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
29646.m001107 B9SGM6 PAC:16804617 Ricinus communis 114  
59172 C1MWM3 PAC:27340913 Micromonas pusilla CCMP1545 253  
Cagra.24552s0001.1.p PAC:28913284 Capsella grandiflora 218  
Glyma.13G043300.1.p A0A0R0GIB8 PAC:30500760 Glycine max 190  
Glyma.16G124300.1.p A0A0R0FPV5 PAC:30559278 Glycine max 137  
Cre16.g696050.t1.1 A0A2K3CS70 PAC:30777479 Chlamydomonas reinhardtii 1690  
Pp3c19_12629V3.1.p A0A2K1IY78 PAC:32938913 Physcomitrium patens 92  
Brdisv1ABR21046750m.p PAC:33752069 Brachypodium distachyon ABR2 221  
Brdisv1Arn11003559m.p PAC:34529194 Brachypodium distachyon Arn1 118  
Zm00008a039320_P01 PAC:37216013 Zea mays PH207 2087  
Bol025629 A0A3P6AQE4 PAC:37345555 Brassica oleracea capitata 282  
PGSC0003DMP400029236 PAC:37426157 Solanum tuberosum 984  
Anaoc.0012s0963.1.p PAC:37500333 Anacardium occidentale 1029  
Pavir.6KG044700.1.p PAC:37694693 Panicum virgatum 68  
Pavir.1NG145500.1.p PAC:37609275 Panicum virgatum 338  
AH005966-RA PAC:38178202 Amaranthus hypochondriacus 304  
AH017464-RA PAC:38168712 Amaranthus hypochondriacus 1008  
HORVU3Hr1G036870.7 PAC:38384641 Hordeum vulgare 209  
HORVU7Hr1G027800.5 PAC:38543834 Hordeum vulgare 428  
HORVU7Hr1G027800.7 PAC:38543833 Hordeum vulgare 436  
HORVU7Hr1G027800.8 PAC:38543832 Hordeum vulgare 485  
HORVU7Hr1G027800.3 PAC:38543838 Hordeum vulgare 362  
HORVU7Hr1G027800.2 PAC:38543837 Hordeum vulgare 376  
HORVU7Hr1G027800.1 PAC:38543836 Hordeum vulgare 381  
Brahy.D02G0239500.1.p PAC:38651883 Brachypodium hybridum 243  
Brahy.S02G0303700.1.p PAC:38641812 Brachypodium hybridum 140  
Lsat_1_v5_gn_3_135120.1 A0A2J6L1K8 PAC:38917362 Lactuca sativa 183  
Isati.1123s0025.1.p PAC:39321211 Isatis tinctoria 585  
Isati.0527s0016.1.p PAC:39304062 Isatis tinctoria 585  
Eusyr.0118s0823.1.p PAC:39694051 Euclidium syriacum 386  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9657938
            9000634
            11752179