Protein Domain : IPR015818

Type:  Domain Name:  Vitellinogen, open beta-sheet, subdomain 2
Description:  Vitellinogen precursors provide the major egg yolk proteins that are a source of nutrients during early development of oviparous vertebrates and invertebrates. Vitellinogen precursors are multi-domain apolipoproteins that are cleaved into distinct yolk proteins. Different vitellinogen precursors exist, which are composed of variable combinations of yolk protein components; however, the cleavage sites are conserved [, ].In vertebrates, a complete vitellinogen is composed of an N-terminal signal peptide for export, followed by four regions that can be cleaved into yolk proteins: lipovitellin-1, phosvitin, lipovitellin-2, and a von Willebrand factor type D domain (YGP40). Vitellinogens are post-translationally glycosylated and phosphorylated in the endoplasmic reticulum and Golgi complex of hepatocytes, before being secreted into the circulatory system to be taken up by oocytes. In the ovary, vitellinogens bind to specific Vtgr receptors on oocyte membranes to become internalised by endocytosis, where they are cleaved into yolk proteins by cathepsin D. YGP40 is released into the yolk plasma before or during compartmentation of lipovitellin-phosvitin complex into the yolk granule.The different yolk proteins have distinct roles. Phosvitins are important in sequestering calcium, iron and other cations for the developing embryo. Phosvitins are one of the most phosphorylated (10%) proteins in nature, the high concentration of phosphate groups providing efficient metal-binding sites in clusters [, ]. Lipovitellins are involved in lipid and metal storage, and contain a heterogeneous mixture of about 16% (w/w) noncovalently bound lipid, most being phospholipid. Lipovitellin-1 contains two chains, LV1N and LV1C [, ].This entry represents an open beta-sheet subdomain found in vitellinogen, which generally corresponds to a domain within the lipovitellin-1 peptide product. This domain adopts a structure consisting of one of several large open beta-sheets Short Name:  Vitellinogen_open_b-sht_sub2

0 Child Features

0 Contains

1 Cross References

Identifier
G3DSA:2.20.80.10

2 Found Ins

DB identifier Type Name
IPR015819 Domain Lipid transport protein, beta-sheet shell
IPR015255 Domain Vitellinogen, open beta-sheet

2 GO Annotations

GO Term Gene Name
GO:0005319 IPR015818
GO:0006869 IPR015818

2 Ontology Annotations

GO Term Gene Name
GO:0005319 IPR015818
GO:0006869 IPR015818

0 Parent Features

77 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
29841.m002849 B9RV58 PAC:16810562 Ricinus communis 190  
Glyma.13G253400.1.p A0A0R0H5M5 PAC:30500860 Glycine max 412  
Glyma.15G061500.1.p A0A0R0G6A6 PAC:30496573 Glycine max 415  
Glyma.19G071300.2.p A0A0R0EIZ6 PAC:30514137 Glycine max 165  
Glyma.19G071300.1.p I1N7A0 PAC:30514136 Glycine max 185  
Sphfalx0016s0261.1.p PAC:32616499 Sphagnum fallax 102  
Sphfalx0294s0012.1.p PAC:32631439 Sphagnum fallax 186  
Pp3c1_37850V3.1.p A9T0M4 PAC:32970451 Physcomitrium patens 231  
Pp3c1_37850V3.2.p A9T0M4 PAC:32970452 Physcomitrium patens 231  
Zosma287g00150.1 A0A0K9PF28 PAC:33175060 Zostera marina 109  
Tp57577_TGAC_v2_mRNA20511 PAC:35983580 Trifolium pratense 250  
Solyc01g017940.1.1 PAC:36139828 Solanum lycopersicum 173  
Solyc01g017960.1.1 PAC:36139312 Solanum lycopersicum 639  
Solyc00g023270.1.1 PAC:36128056 Solanum lycopersicum 179  
evm.model.Scaffold_671.991 PAC:37853139 Coffea arabica 841  
evm.model.Scaffold_315.777 PAC:37902951 Coffea arabica 549  
evm.model.Scaffold_624.316 PAC:37844306 Coffea arabica 497  
Sobic.001G106200.1.p C5WM19 PAC:37939476 Sorghum bicolor 360  
VIT_205s0049g02140.1 PAC:38072204 Vitis vinifera 513  
VIT_205s0077g00640.1 PAC:38073495 Vitis vinifera 92  
Gohir.A06G034700.2.p PAC:38129468 Gossypium hirsutum 287  
Gohir.A06G034700.1.p PAC:38129467 Gossypium hirsutum 287  
Gohir.A06G034700.3.p PAC:38129469 Gossypium hirsutum 287  
Brahy.S07G0193200.1.p PAC:38602348 Brachypodium hybridum 108  
SbRio.01G110500.1.p C5WM19 PAC:38995877 Sorghum bicolor Rio 360  
Myper.0034s0155.1.p PAC:39112557 Myagrum perfoliatum 121  
Luann.0021s0264.1.p PAC:39400710 Lunaria annua 325  
Sialb.2317s0005.1.p PAC:39590404 Sinapis alba 69  
Clevi.0062s0199.1.p PAC:39725269 Cleome violacea 686  
Distr.0233s0016.1.p PAC:40033338 Diptychocarpus strictus 290  

6 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9687371
            12135361
            17314313
            9692232
            17189915
            8838584