Protein Domain : IPR012827

Type:  Domain Name:  Haemerythrin, metal-binding domain
Description:  The haemerythrin family is composed of haemerythrin proteins found in invertebrates, and a broader collection of bacterial and archaeal homologues. Haemerythrin is an oxygen-binding protein found in the vascular system and coelemic fluid, or in muscles (myohaemerythrin) in invertebrates []. Many of the homologous proteins found in prokaryotes are multi-domain proteins with signal-transducing domains such as the GGDEF diguanylate cyclase domain () and methyl-accepting chemotaxis protein (MCP) signalling domain (). Most haemerythrins are oxygen-carriers with a bound non-haem iron, but at least one example is a cadmium-binding protein, apparently with a role in sequestering toxic metals rather than in binding oxygen. The prokaryote with the most instances of this domain is Magnetococcus sp. MC-1, a magnetotactic bacterium.Haemerythrins and myohaemerythrins [, ] are small proteins of about 110 to 129 amino acid residues that bind two iron atoms. They are left-twisted 4-alpha-helical bundles, which provide a hydrophobic pocket where dioxygen binds as a peroxo species, interacting with adjacent aliphatic side chains via van der Waals forces []. In both haemerythrins and myohaemerythrins, the active centre is a binuclear iron complex, bound directly to the protein via 7 amino acid side chains [], 5 His, 1 Glu and 1 Asp []. Ovohaemerythrin [], a yolk protein from the leech Theromyzon tessulatumseems to belong to this family of proteins, it may play a role in the detoxification of free iron after a blood meal [].This entry represents a metal-binding domain found in the haemerythrin family. In haemerythrin this domain binds iron. Short Name:  Haemerythrin_metal-bd

0 Child Features

1 Contains

DB identifier Type Name
IPR016131 Binding_site Haemerythrin, iron-binding site

3 Cross Referencess

Identifier
TIGR02481
G3DSA:1.20.120.50
SSF47188

1 Found In

DB identifier Type Name
IPR002063 Family Haemerythrin

1 GO Annotation

GO Term Gene Name
GO:0046872 IPR012827

1 Ontology Annotations

GO Term Gene Name
GO:0046872 IPR012827

1 Parent Features

DB identifier Type Name
IPR012312 Domain Haemerythrin-like

359 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
30138.m003830 B9RL98 PAC:16819201 Ricinus communis 760  
Cucsa.342790.2 PAC:16979438 Cucumis sativus 217  
orange1.1g015878m A0A067HAK6 PAC:18091728 Citrus sinensis 399  
orange1.1g022537m A0A067GYP0 PAC:18091729 Citrus sinensis 295  
orange1.1g023564m A0A067GZ22 PAC:18091730 Citrus sinensis 280  
Lus10017543 PAC:23163217 Linum usitatissimum 690  
Lus10028746 PAC:23177252 Linum usitatissimum 580  
183461 C1MI38 PAC:27345876 Micromonas pusilla CCMP1545 358  
104661 C1EJG7 PAC:27397059 Micromonas sp RCC299 347  
60482 C1FFE0 PAC:27403537 Micromonas sp RCC299 275  
33318 A4S242 PAC:27413746 Ostreococcus lucimarinus 254  
Thecc1EG022026t1 A0A061ES28 PAC:27424920 Theobroma cacao 754  
Thecc1EG046885t1 A0A061FDM3 PAC:27457446 Theobroma cacao 425  
Cagra.0952s0003.1.p PAC:28900747 Capsella grandiflora 731  
Glyma.07G061300.1.p I1KI11 PAC:30495470 Glycine max 656  
Glyma.19G252300.1.p K7N088 PAC:30512719 Glycine max 643  
Glyma.20G084900.1.p K7N2B8 PAC:30521174 Glycine max 609  
Cre16.g670750.t1.2 A0A2K3CUI5 PAC:30777645 Chlamydomonas reinhardtii 244  
Cre09.g414150.t3.1 A0A2K3DFW8 PAC:30780900 Chlamydomonas reinhardtii 420  
Cre09.g414150.t2.1 A0A2K3DFW8 PAC:30780901 Chlamydomonas reinhardtii 420  
Cre09.g414150.t1.1 A0A2K3DFW8 PAC:30780899 Chlamydomonas reinhardtii 420  
Medtr3g435880.1 A0A072UVD9 PAC:31056038 Medicago truncatula 246  
Medtr8g028230.1 G7ZYR7 PAC:31073391 Medicago truncatula 559  
Medtr8g028230.3 A0A072TPH0 PAC:31073393 Medicago truncatula 472  
Medtr8g028230.2 A0A072TMV3 PAC:31073392 Medicago truncatula 518  
SapurV1A.0195s0320.1.p PAC:31413432 Salix purpurea 638  
Traes_3AL_634A11206.2 PAC:31836063 Triticum aestivum 156  
Traes_3AL_634A11206.3 PAC:31836064 Triticum aestivum 156  
Traes_3AL_634A11206.4 PAC:31836062 Triticum aestivum 156  
Traes_3AL_634A11206.1 PAC:31836061 Triticum aestivum 184  

5 Publications

First Author Title Year Journal Volume Pages PubMed ID
            1425663
            2065779
            3681996
            3856224
            2362933