Protein Domain : IPR005546

Type:  Domain Name:  Autotransporter beta-domain
Description:  Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease []. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C terminus of the proteins it occurs in. The N terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs []. Short Name:  Autotransporte_beta

0 Child Features

0 Contains

5 Cross Referencess

Identifier
PF03797
PS51208
SM00869
G3DSA:2.40.128.130
SSF103515

6 Found Ins

DB identifier Type Name
IPR006315 Domain Outer membrane autotransporter barrel
IPR016955 Family Autotransporter, YhjY, predicted
IPR003991 Family Pertactin virulence factor family
IPR003992 Family Pertactin
IPR017318 Family Peptidase S8A, subtilisin-related, campylobacter
IPR017186 Family Lipase, autotransporter EstA

0 GO Annotation

0 Ontology Annotations

0 Parent Features

115 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
32887.m000025 PAC:16825602 Ricinus communis 248  
Lus10006861 PAC:23144416 Linum usitatissimum 380  
Gorai.007G344700.4 A0A0D2PIS7 PAC:26785078 Gossypium raimondii 293  
Gorai.007G344700.3 A0A0D2R3N9 PAC:26785077 Gossypium raimondii 335  
Gorai.007G344700.2 A0A0D2SP56 PAC:26785076 Gossypium raimondii 371  
Gorai.007G344700.1 A0A0D2SV46 PAC:26785075 Gossypium raimondii 396  
Gorai.007G285400.1 PAC:26785318 Gossypium raimondii 401  
Thecc1EG026403t1 A0A061F284 PAC:27422570 Theobroma cacao 398  
Thecc1EG026403t2 A0A061F388 PAC:27422571 Theobroma cacao 345  
Medtr4g079380.1 G7JUZ9 PAC:31111642 Medicago truncatula 130  
Medtr8g087830.1 G7L7Z3 PAC:31071992 Medicago truncatula 71  
Medtr8g461180.1 A0A072TRM5 PAC:31069474 Medicago truncatula 124  
Spipo18G0011600 PAC:31518553 Spirodela polyrhiza 857  
Manes.03G199400.1.p A0A2C9W926 PAC:32363204 Manihot esculenta 190  
Mapoly0016s0031.1.p A0A2R6XFX1 PAC:33026962 Marchantia polymorpha 86  
Brdisv1pangenome1006798m.p PAC:33624588 Brachypodium distachyon Pangenome 619  
Brdisv1ABR6_r1014047m.p PAC:33684494 Brachypodium distachyon ABR6 104  
Brdisv1Bis-11009276m.p PAC:33775101 Brachypodium distachyon Bis-1 494  
Brdisv1Mon31012952m.p PAC:34314072 Brachypodium distachyon Mon3 104  
Brdisv1Arn11045700m.p PAC:34515202 Brachypodium distachyon Arn1 142  
Brdisv1BdTR11I1045691m.p PAC:34919143 Brachypodium distachyon BdTR11i 142  
Brdisv1BdTR11I1009479m.p PAC:34890310 Brachypodium distachyon BdTR11i 297  
Brdisv1Mur11012634m.p PAC:35336324 Brachypodium distachyon Mur1 104  
Brdisv1BdTR11A1041115m.p PAC:35687644 Brachypodium distachyon BdTR11a 773  
Brdisv1BdTR11A1041604m.p PAC:35696107 Brachypodium distachyon BdTR11a 3429  
AL7G25830.t1 PAC:35938722 Arabidopsis lyrata 418  
Tp57577_TGAC_v2_mRNA10575 PAC:35968754 Trifolium pratense 67  
Tp57577_TGAC_v2_mRNA20888 PAC:35965594 Trifolium pratense 82  
Oropetium_20150105_19540A PAC:35994926 Oropetium thomaeum 238  
Solyc01g065710.2.1 PAC:36137253 Solanum lycopersicum 116  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            3027577
            9778731