Protein Domain : IPR015919

Type:  Domain Name:  Cadherin-like
Description:  This entry represents domains with an immunoglobulin-like beta-sandwich fold, consisting of 7 strands in two sheets with a Greek key topology. Such domains are found in cadherin, as well as at the N-terminal of dystroglycan. Dystroglycan is a cell surface receptor consisting of two subunits: alpha-dystroglycan, extracellular and highly glycosylated, and beta-dystroglycan, spanning the cell membrane. It is a pivotal member of the dystrophin-glycoprotein complex and is involved in a wide variety of important cellular processes such as the stabilisation of the muscle fibre sarcolemma or the clustering of acetylcholine receptors [, , ].Cadherins are a family of adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in all solid tissues of the organism which modulate a wide variety of processes including cell polarisation and migration [, ]. Cadherin-mediated cell-cell junctions are formed as a result of interaction between extracellular domains of identical cadherins, which are located on the membranes of the neighbouring cells. The stability of these adhesive junctions is ensured by binding of the intracellular cadherin domain with the actin cytoskeleton. There are a number of different isoforms distributed in a tissue-specific manner in a wide variety of organisms. Cells containing different cadherins tend to segregate in vitro, while those that contain the same cadherins tend to preferentially aggregate together. This observation is linked to the finding that cadherin expression causes morphological changes involving the positional segregation of cells into layers, suggesting they may play an important role in the sorting of different cell types during morphogenesis, histogenesis and regeneration. They may also be involved in the regulation of tight and gap junctions, and in the control of intercellular spacing. Cadherins are evolutionary related to the desmogleins which are component of intercellular desmosome junctions involved in the interaction of plaque proteins.Structurally, cadherins comprise a number of domains: classically, these include a signal sequence; a propeptide of around 130 residues; a single transmembrane domain and five tandemly repeated extracellular cadherin domains, 4 of which are cadherin repeats, and the fifth contains 4 conserved cysteines and a N-terminal cytoplasmic domain []. However, proteins are designated as members of the broadly defined cadherin family if they have one or more cadherin repeats. A cadherin repeat is an independently folding sequence of approximately 110 amino acids that contains motifs with the conserved sequences DRE, DXNDNAPXF, and DXD. Crystal structures have revealed that multiple cadherin domains form Ca2+-dependent rod-like structures with a conservedCa2+-binding pocket at the domain-domain interface. Cadherins depend on calcium for their function: calcium ions bind to specific residues in each cadherin repeat to ensure its proper folding, to confer rigidity upon the extracellular domain and is essential for cadherin adhesive function and for protection against protease digestion. Short Name:  Cadherin-like

2 Child Features

DB identifier Type Name
IPR002126 Domain Cadherin
IPR006644 Domain Dystroglycan-type cadherin-like

4 Contains

DB identifier Type Name
IPR019599 Domain Alpha-galactosidase, NEW1 domain
IPR020894 Conserved_site Cadherin conserved site
IPR014868 Domain Cadherin prodomain
IPR013164 Domain Cadherin, N-terminal

1 Cross References

Identifier
SSF49313

1 Found In

DB identifier Type Name
IPR008009 Family Putative Ig

2 GO Annotations

GO Term Gene Name
GO:0005509 IPR015919
GO:0016020 IPR015919

2 Ontology Annotations

GO Term Gene Name
GO:0005509 IPR015919
GO:0016020 IPR015919

0 Parent Features

21 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
34798.m000014 B9TF41 PAC:16826353 Ricinus communis 483  
42996.m000017 B9TK50 PAC:16827564 Ricinus communis 256  
46755.m000013 B9TPW4 PAC:16827918 Ricinus communis 210  
49728.m000015 B9TPA4 PAC:16828201 Ricinus communis 277  
61966 I0Z1L7 PAC:27387397 Coccomyxa subellipsoidea C-169 188  
204393 PAC:27346487 Micromonas pusilla CCMP1545 1557  
56131 C1DXX9 PAC:27396252 Micromonas sp RCC299 1596  
32797 A4S0M4 PAC:27414120 Ostreococcus lucimarinus 1479  
Medtr2148s0010.1 A0A072TCY1 PAC:31084558 Medicago truncatula 232  
Traes_4AL_846BB7723.1 PAC:31933421 Triticum aestivum 374  
Sevir.1G276100.1.p A0A4U6WFC4 PAC:32665347 Setaria viridis 156  
Pp3s42_120V3.1.p PAC:32945169 Physcomitrium patens 1862  
Brdisv1pangenome1007752m.p PAC:33657221 Brachypodium distachyon Pangenome 609  
Brdisv1BdTR11A1048788m.p PAC:35696618 Brachypodium distachyon BdTR11a 748  
Brdisv1BdTR11A1042807m.p PAC:35696697 Brachypodium distachyon BdTR11a 644  
Solyc00g112490.1.1 PAC:36128393 Solanum lycopersicum 405  
Isati.2236s0006.1.p PAC:39273210 Isatis tinctoria 192  
Sevir.1G276100.1.p A0A4U6WFC4 PAC:40605108 Setaria viridis 156  
Solyc00g112490.2.1 PAC:41467045 Solanum lycopersicum 404  
Manes.10G015200.11.p PAC:41842312 Manihot esculenta 428  
Manes.10G015200.10.p PAC:41842311 Manihot esculenta 428  

6 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11736639
            11909544
            2197976
            14570569
            15326183
            16410545