Protein Domain : IPR016115

Type:  Domain Name:  Bacteriophage PRD1, P3, N-terminal
Description:  The major capsid protein P3 from Bacteriophage PRD1adopts a double-barrel structure comprising two eight-stranded viral beta-barrels or jelly rolls, each of which contains a 12-residue alpha-helix. This protein then trimerises through a 'trimerisation loop' sequence, and is incorporated within the viral capsid []. This entry represents a structural subdomain with a distorted beta-sandwich topology. Short Name:  Phage_PRD1_P3_N
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0 Child Features

0 Contains

1 Cross References

Identifier
G3DSA:2.70.9.30

2 Found Ins

DB identifier Type Name
IPR016112 Domain Group II dsDNA virus coat/capsid protein
IPR015108 Family Bacteriophage PRD1, P3

0 GO Annotation

0 Ontology Annotations

0 Parent Features

32 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
35661.m000020 B9TE05 PAC:16826696 Ricinus communis 448  
AT2G45410.1 O22132 PAC:19641715 Arabidopsis thaliana 191  
Brdisv1BdTR7a1028882m.p PAC:33333972 Brachypodium distachyon BdTR7a 96  
Brdisv1Tek-41015050m.p PAC:33475347 Brachypodium distachyon Tek-4 96  
Brdisv1Tek-21026668m.p PAC:33886755 Brachypodium distachyon Tek-2 96  
Brdisv1Bd29-11039074m.p PAC:34139968 Brachypodium distachyon Bd29-1 96  
Brdisv1Luc11022467m.p PAC:34175877 Brachypodium distachyon Luc1 123  
Brdisv1BdTR8i1037309m.p PAC:34236226 Brachypodium distachyon BdTR8i 96  
Brdisv1Bd1-11033966m.p PAC:34273803 Brachypodium distachyon Bd1-1 96  
Brdisv1Mon31027412m.p PAC:34288537 Brachypodium distachyon Mon3 96  
Brdisv1ABR81034108m.p PAC:34578997 Brachypodium distachyon ABR8 96  
Brdisv1Bd18-11022754m.p PAC:34857648 Brachypodium distachyon Bd18-1 123  
Brdisv1Foz11020609m.p PAC:35029742 Brachypodium distachyon Foz1 123  
Brdisv1Jer11020329m.p PAC:35433606 Brachypodium distachyon Jer1 123  
AUR62039137-RA PAC:36323308 Chenopodium quinoa 183  
Bol036098 PAC:37357494 Brassica oleracea capitata 681  
AT2G45410.1 O22132 PAC:37380875 Arabidopsis thaliana 191  
PGSC0003DMP400068878 PAC:37425001 Solanum tuberosum 231  
Cz10g07280.t1 PAC:38244134 Chromochloris zofingiensis 295  
Cz13g05020.t1 PAC:38248260 Chromochloris zofingiensis 167  
Brahy.D01G0728400.1.p PAC:38604928 Brachypodium hybridum 140  
Brahy.D01G0428900.1.p PAC:38614431 Brachypodium hybridum 139  
Brahy.D02G0742800.1.p PAC:38653218 Brachypodium hybridum 115  
Brahy.D05G0363000.1.p PAC:38598755 Brachypodium hybridum 85  
Ibeam.2698s0003.1.p PAC:39766175 Iberis amara 282  
Stapi.9756s0001.1.p PAC:39862906 Stanleya pinnata 162  
MD11G1240400 PAC:40133410 Malus domestica 84  
Thint.19G0701600.2.p PAC:40807691 Thinopyrum intermedium 402  
Thint.19G0701600.1.p PAC:40807690 Thinopyrum intermedium 402  
Thint.19G0701600.3.p PAC:40807692 Thinopyrum intermedium 402  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11752778